SRA STUDY
SRA Study Id ERP106940  (Link to NCBI )
Study Title Gene expression of indoor fungal communities under damp building conditions : implications for human health
SRA Experiments
SRA Experiment Id ERX2360376  (Link to NCBI )
Experiment Title Illumina HiSeq 4000 paired end sequencing
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection cDNA
Library Name NA
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_4000
   
SRA Experiment Id ERX2360377  (Link to NCBI )
Experiment Title Illumina HiSeq 4000 paired end sequencing
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection cDNA
Library Name NA
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_4000
   
SRA Experiment Id ERX2360378  (Link to NCBI )
Experiment Title Illumina HiSeq 4000 paired end sequencing
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection cDNA
Library Name NA
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_4000
   
SRA Experiment Id ERX2360372  (Link to NCBI )
Experiment Title Illumina HiSeq 4000 paired end sequencing
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection cDNA
Library Name NA
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_4000
   
SRA Experiment Id ERX2360373  (Link to NCBI )
Experiment Title Illumina HiSeq 4000 paired end sequencing
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection cDNA
Library Name NA
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_4000
   
SRA Experiment Id ERX2360374  (Link to NCBI )
Experiment Title Illumina HiSeq 4000 paired end sequencing
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection cDNA
Library Name NA
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_4000
   
SRA Experiment Id ERX2360375  (Link to NCBI )
Experiment Title Illumina HiSeq 4000 paired end sequencing
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection cDNA
Library Name NA
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_4000
   
SRA Experiment Id ERX2360370  (Link to NCBI )
Experiment Title Illumina HiSeq 4000 paired end sequencing
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection cDNA
Library Name NA
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_4000
   
SRA Experiment Id ERX2360371  (Link to NCBI )
Experiment Title Illumina HiSeq 4000 paired end sequencing
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection cDNA
Library Name NA
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_4000
Study Abstract Dampness and visible mold growth in homes is associated with negative human health outcomes but causal relationships between fungal exposure and health are not well established. The purpose of this study was to determine if dampness in buildings impacts fungal community gene expression and how, in turn, gene expression may modulate human health impacts. A metatranscriptomic study was performed on house dust fungal communities to investigate the expression of genes and metabolic processes in chamber experiments at water activity levels of 0.5, 0.85 and 1.0. Fungi at water activities as low as 0.5 were metabolically active, focusing their transcriptional resources on primary processes essential for cell maintenance. Metabolic complexity increased with water activity where communities at 1.0 displayed more diverse secondary metabolic processes. Greater gene expression at increasing water activities has important implications for human health: fungal communities at 1.0 aw up-regulated a greater number of allergen, mycotoxin, and pathogenicity encoding genes versus communities at 0.85 and 0.5 aw. In damp buildings, fungi may display increases in secondary metabolic processes with the potential for greater per cell production of allergens, toxins, and pathogenicity. Assessments in wet versus dry buildings that do not account for this elevated health impact may not accurately reflect exposure.
Alias ena-STUDY-YALE UNIVERSITY-20-02-2018-04:43:16:981-604
External Id BioProject=PRJEB25059