SRA STUDY
SRA Study Id ERP005626  (Link to NCBI )
Study Title Microbial biodiversity and structure in soil affects the composition of pyrrolizidine alkaloids in Jacobaea vulgaris
SRA Experiments
SRA Experiment Id ERX452737  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452736  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452739  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452738  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452777  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452733  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452776  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452779  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452735  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452734  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452778  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452773  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452772  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452775  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452774  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452771  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452770  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452803  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452802  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452769  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452804  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452766  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452765  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452801  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452768  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452800  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452767  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452762  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452761  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452764  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452763  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452760  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452759  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452758  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452799  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452755  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452798  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452754  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452757  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452756  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452795  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452751  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452750  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452794  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452797  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452753  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452752  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452796  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452791  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452790  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452793  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452792  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452748  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452747  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452749  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452744  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452788  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452743  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452787  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452746  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452789  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452745  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452740  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452784  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452783  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452742  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452786  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452785  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452741  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452780  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452782  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id ERX452781  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
Study Abstract Secondary metabolites like pyrrolizidine alkaloids (PAs) act as defense compounds against aboveground and belowground attackers. We studied to get a better understanding of relevance of microbial diversity in the rhizosphere for plant growth and behavior, specifically related to secondary metabolites production. We made soil dilution to compare the composition of soil microbial communities of soil suspension, incubation and rhizosphere soil by 16s rRNA high throughput pyrosequencing, as a consequence, to determine the effects on plant behaviors. The dilution procedure leads to reduction of the diversity of bacteria at the phylum level. After regrown, the structure of microbial community in the rhizosphere changed significantly as compared to the composition in the incubated soil. Jacobeae vulgaris as model plants growing in the soil where microbial diversity were decreased, had a higher biomass and higher amount of free base form of PAs' production, which indicates the reduction of soil microbial community in the rhizosphere shows significant feedback. Our study adds evidence that soil microbes may play a role in the evolution of plant secondary metabolites in plants.
Alias ena-STUDY-yanyan-23-04-2014-09:17:15:611-61
External Id BioProject=PRJEB6154