SRA EXPERIMENT
SRA Experiment Id SRX8019066  (Link to NCBI )
Experiment Title WGS: Escherichia coli UMB9246
SRA Study
SRA Study Id SRP072679  (Link to NCBI )
Study Title Female Urinary Microbiota Genome Sequencing
Study Abstract Recently, bacterial communities (microbiota) have been discovered in the female bladder. Thus, the “sterile urine” paradigm is no longer valid. In an effort to provide a comprehensive view of the newly discovered female urinary microbiota (FUM), we have established an Enhanced Quantitative Urine Culture (EQUC) protocol. EQUC isolates bacteria from 75-90% of urine samples deemed ‘no growth’ by the standard clinical microbiology urine culture method. We have begun to sequence and annotate the genomes of these isolated bacteria.
Alias PRJNA316969
External Id BioProject=PRJNA316969
SRA Sample
SRA Sample Id SRS6392403  (Link to NCBI )
SRA Run
SRA Run Id SRR11441020  (Link to NCBI )
Spots 1408737
Bases 361899097
Size 154876731
Published Date 2020-03-28
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Ec_UMB9246
Library Layout PAIRED
Library Instrument NEXT_SEQ_550
Exp. Description
Spot Length