SRA EXPERIMENT
SRA Experiment Id SRX6878797  (Link to NCBI )
Experiment Title WGS of Staphylococcus epidermidis UMB1188
SRA Study
SRA Study Id SRP072679  (Link to NCBI )
Study Title Female Urinary Microbiota Genome Sequencing
Study Abstract Recently, bacterial communities (microbiota) have been discovered in the female bladder. Thus, the “sterile urine” paradigm is no longer valid. In an effort to provide a comprehensive view of the newly discovered female urinary microbiota (FUM), we have established an Enhanced Quantitative Urine Culture (EQUC) protocol. EQUC isolates bacteria from 75-90% of urine samples deemed ‘no growth’ by the standard clinical microbiology urine culture method. We have begun to sequence and annotate the genomes of these isolated bacteria.
Alias PRJNA316969
External Id BioProject=PRJNA316969
SRA Sample
SRA Sample Id SRS5414545  (Link to NCBI )
SRA Run
SRA Run Id SRR10153397  (Link to NCBI )
Spots 417903
Bases 168260998
Size 84980661
Published Date 2019-09-20
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Se1188
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
Exp. Description
Spot Length