SRA EXPERIMENT
SRA Experiment Id SRX1688291  (Link to NCBI )
Experiment Title Gardnerella vaginalis 18-4
SRA Study
SRA Study Id SRP072679  (Link to NCBI )
Study Title Female Urinary Microbiota Genome Sequencing
Study Abstract Recently, bacterial communities (microbiota) have been discovered in the female bladder. Thus, the “sterile urine” paradigm is no longer valid. In an effort to provide a comprehensive view of the newly discovered female urinary microbiota (FUM), we have established an Enhanced Quantitative Urine Culture (EQUC) protocol. EQUC isolates bacteria from 75-90% of urine samples deemed ‘no growth’ by the standard clinical microbiology urine culture method. We have begun to sequence and annotate the genomes of these isolated bacteria.
Alias PRJNA316969
External Id BioProject=PRJNA316969
SRA Sample
SRA Sample Id SRS1382828  (Link to NCBI )
Title Gardnerella vaginalis 18-4
SRA Run
SRA Run Id SRR3350474  (Link to NCBI )
Spots 939964
Bases 277250603
Size 168546865
Published Date 2016-05-02
   
SRA Run Id SRR3350470  (Link to NCBI )
Spots 255367
Bases 77120834
Size 36238255
Published Date 2016-05-02
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name G. vaginalis 18-4
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
Exp. Description
Spot Length