SRA EXPERIMENT
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SRA Experiment Id
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ERX3967078
(Link to NCBI )
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Experiment Title
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NextSeq 500 paired end sequencing
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SRA Study
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SRA Study Id |
ERP120075
(Link to NCBI ) |
Study Title |
Complete genome sequences of three novel Clostridia strains isolated from a chain elongation reactor |
Study Abstract |
Hitherto, few bacterial species have been reported to convert lactate to n-caproate. Here, we report the complete genome sequences of three novel Clostridia strains that were isolated from an anaerobic bioreactor producing caproate from lactate-rich corn silage. The strains were isolated on lactate as sole carbon source and produce n-caproate, n-butyrate and iso-butyrate, besides acetate. Genomes were assembled using a short-read and long-read sequencing hybrid approach and genes involved in lactate-based chain elongation were identified. |
Alias |
ena-STUDY-HELMHOLTZ CENTRE FOR ENVIRONMENTAL RESEARCH - UFZ-18-02-2020-13:22:51:987-430 |
External Id |
PRJEB36835 |
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SRA Sample
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SRA Run
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Exp Library Strategy
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WGS
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Library Source
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GENOMIC
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Library Selection
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size fractionation
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Library Name
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unspecified
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Library Layout
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PAIRED
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Library Instrument
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NEXT_SEQ_500
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Exp. Description
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Spot Length
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