SRA EXPERIMENT
SRA Experiment Id ERX2690665  (Link to NCBI )
Experiment Title MinION sequencing
SRA Study
SRA Study Id ERP109193  (Link to NCBI )
Study Title Enhanced annotation of microbiomes and their genetic repertoires implicated in anaerobic digestions for the generation of biogas
Study Abstract A Biogas Metagenomics Hybrid Assembly (BioMETHA) database,specific for the microbiome of biogas plants, was generated using a dedicatedassembly strategy for the metagenomic datasets. Long reads from nanoporesequencing (MinION) were combined with short, more accurate secondgeneration sequencing reads (Illumina HiSeq). Binning following assembly resulted in 231 genomic bins with an average completeness of 47%. Functional annotation identified roughly 207k genes, specific for biogas plant microbiomes. BioMETHA allows mapping of up to 73% of DNA samples derived from various biogas plants.
Alias ena-STUDY-FRAUNHOFER IGB-05-06-2018-11:44:14:063-3579
External Id BioProject=PRJEB27149
SRA Sample
SRA Sample Id ERS2544814  (Link to NCBI )
Title Bgp3 ONT
SRA Run
SRA Run Id ERR2675611  (Link to NCBI )
Spots 113545
Bases 742884898
Size 903218593
Published Date 2018-12-02
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection unspecified
Library Name Bgp3 ONT
Library Layout SINGLE
Library Instrument MIN_ION
Exp. Description
Spot Length