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SRA STUDY
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SRA Study Id
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SRP157056
(Link to NCBI )
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Study Title
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Isolates of two closely related phytophthora species causing either red core disease on Strawberry (P.fragariae) or Raspberry root rot (P.rubi). Genome sequencing and assembly
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SRA Experiments
|
| SRA Experiment Id |
SRX4528651
(Link to NCBI ) |
| Experiment Title |
DNA-Seq of Phytophthora rubi isolate SCRP333: Liquid grown mycelium |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
SCRP333_Illumina |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX4528662
(Link to NCBI ) |
| Experiment Title |
DNA-Seq of Phytophthora fragariae isolate BC-23: Liquid grown mycelium |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
BC-23_Illumina |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX4528652
(Link to NCBI ) |
| Experiment Title |
DNA-Seq of Phytophthora fragariae isolate SCRP245: Liquid grown mycelium |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
SCRP245_Illumina |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX4528663
(Link to NCBI ) |
| Experiment Title |
DNA-Seq of Phytophthora fragariae isolate NOV-77: Liquid grown mycelium |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
NOV-77_Illumina |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX4528660
(Link to NCBI ) |
| Experiment Title |
DNA-Seq of Phytophthora fragariae isolate BC-16: Liquid grown mycelium |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
BC-16_Illumina |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX4528661
(Link to NCBI ) |
| Experiment Title |
DNA-Seq of Phytophthora fragariae isolate ONT-3: Liquid grown mycelium |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
ONT-3_Illumina |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX4528655
(Link to NCBI ) |
| Experiment Title |
DNA-Seq of Phytophthora fragariae isolate BC-1: Liquid grown mycelium |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
BC-1_Illumina |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX4528656
(Link to NCBI ) |
| Experiment Title |
DNA-Seq of Phytophthora fragariae isolate BC-16: Liquid grown mycelium |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
BC-16_PacBio |
| Library Layout |
SINGLE |
| Library Instrument |
PAC_BIO_RS_II |
| |
|
| SRA Experiment Id |
SRX4528653
(Link to NCBI ) |
| Experiment Title |
DNA-Seq of Phytophthora rubi isolate SCRP249: Liquid grown mycelium |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
SCRP249_Illumina |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX4528664
(Link to NCBI ) |
| Experiment Title |
DNA-Seq of Phytophthora fragariae isolate NOV-71: Liquid grown mycelium |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
NOV-71_Illumina |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX4528654
(Link to NCBI ) |
| Experiment Title |
DNA-Seq of Phytophthora fragariae isolate A4: Liquid grown mycelium |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
A4_Illumina |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX4528665
(Link to NCBI ) |
| Experiment Title |
DNA-Seq of Phytophthora rubi isolate SCRP324: Liquid grown mycelium |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
SCRP324_Illumina |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
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| SRA Experiment Id |
SRX4528659
(Link to NCBI ) |
| Experiment Title |
DNA-Seq of Phytophthora fragariae isolate NOV-5: Liquid grown mycelium |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
NOV-5_Illumina |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX4528658
(Link to NCBI ) |
| Experiment Title |
DNA-Seq of Phytophthora fragariae isolate NOV-27: Liquid grown mycelium |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
NOV-27_Illumina |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
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Study Abstract
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Alias
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PRJNA396163
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External Id
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PRJNA396163
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