|
SRA STUDY
|
|
SRA Study Id
|
SRP041587
(Link to NCBI )
|
|
Study Title
|
Vibrio parahaemolyticus GenomeTrakr - US Food and Drug Administration, Center for Food Safety and Applied Nutrition
|
|
SRA Experiments
|
| SRA Experiment Id |
SRX1124409
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018760_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX1124407
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018758_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX609779
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007446 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007446 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1124408
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN001174_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX609010
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007430 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007430 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1124410
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018761_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX609012
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007459 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007459 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529940
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007451 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007451 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX609011
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN012492 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN012492 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529942
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007453 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007453 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX610652
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007432 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007432 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529943
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007435 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007435 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX609013
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN012493 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN012493 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX610656
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007444 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007444 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX610655
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN006133 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN006133 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX610654
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O4:K12 str. CFSAN001614 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001614 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX610653
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007439 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007439 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX610659
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN012494 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN012494 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX610658
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN006130 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN006130 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX610657
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O4:K12 str. CFSAN001612 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001612 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX609029
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007462 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007462 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX609028
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007456 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007456 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX609702
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007453 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007453 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX609701
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN006132 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN006132 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX609705
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007441 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007441 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1124401
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018766_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX1124402
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018767_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX1704859
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP22 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX1704858
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP29 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX1124400
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018765_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX609781
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007429 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007429 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1124405
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018756_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX609025
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN006135 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN006135 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1124406
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018757_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX609024
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007438 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007438 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1124403
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018754_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX609027
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O12:K12 str. CFSAN001618 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001618 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1124404
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018755_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX529958
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007431 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007431 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529959
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007455 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007455 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1704857
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP20 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX1704856
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP19 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX609754
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007454 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007454 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529881
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O4:K9 str. 98-513-F52 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. 98-513-F52 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529882
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O4:K12 str. CFSAN001611 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001611 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529883
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN006134 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN006134 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529884
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007436 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007436 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1124399
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018764_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX529885
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007449 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007449 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529886
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN006129 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN006129 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529920
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O4:K12 str. CFSAN001619 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001619 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529887
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007434 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007434 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529888
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007437 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007437 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529921
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007430 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007430 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX609753
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007437 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007437 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529922
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007452 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007452 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529924
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007454 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007454 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529925
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007444 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007444 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1124397
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018762_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX1124398
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018763_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX1124395
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018752_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX1124396
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN018753_1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX609766
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O4:K12 str. CFSAN001619 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001619 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX609009
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O4:K12 str. CFSAN001620 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001620 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX609768
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007440 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007440 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529890
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007458 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007458 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529892
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN012494 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN012494 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX609000
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O6:K18 str. CFSAN001617 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001617 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529931
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007447 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007447 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529932
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007456 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007456 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529933
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007460 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007460 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529934
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O4:K12 str. CFSAN001612 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001612 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529936
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O4:K12 str. CFSAN001614 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001614 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529937
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN006132 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN006132 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529938
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007462 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007462 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529939
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN006130 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN006130 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1305380
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863434 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025061_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX529900
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O4:K12 str. K1203 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. K1203 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529901
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007442 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007442 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529903
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007445 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007445 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529904
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN012492 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN012492 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529905
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN006133 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN006133 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529906
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007438 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007438 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529908
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007448 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007448 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529909
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN012491 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN012491 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1305374
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863428 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025056_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX1305375
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863429 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025057_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX1305376
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863430 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025058_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX1305378
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863432 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025059_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX1305379
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863433 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025060_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX1305370
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863424 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN029654_01_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX609740
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007461 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007461 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1305371
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863425 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN029656_01_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX529910
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN006135 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN006135 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1305372
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863426 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025054_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX529911
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007439 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007439 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1305373
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863427 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025055_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX609741
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007457 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007457 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529912
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007459 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007459 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529879
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O4:K12 str. CFSAN001613 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001613 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529913
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN012493 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN012493 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529914
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O6:K18 str. CFSAN001617 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001617 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529916
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O4:K12 str. CFSAN001620 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001620 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529917
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN006131 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN006131 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529918
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007450 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007450 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529919
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O12:K12 str. CFSAN001618 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001618 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1704860
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP25 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX1305363
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863417 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025063_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX608985
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007450 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007450 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1305364
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863418 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025064_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX608984
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007436 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007436 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1305365
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863419 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025065_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX1305366
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863420 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025066_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX608986
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN006131 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN006131 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1305367
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863421 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025067_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX608989
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O4:K12 str. CFSAN001611 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001611 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1305368
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863422 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025068_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX608988
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN006134 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN006134 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1305369
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863423 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN029653_01_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX529960
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007457 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007457 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX609032
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007449 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007449 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX609031
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007434 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007434 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529962
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007432 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007432 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX609792
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007433 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007433 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529964
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007446 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007446 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1305360
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863414 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025052_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX529965
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007461 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007461 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1305361
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863415 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025053_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX608983
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus subsp. serovar O4:K12 str. CFSAN001613 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN001613 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1305362
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| SRA Submission ID |
1863416 |
| Submitter |
Narjol Gonzalez-Escalona (narjol@gmail.com) |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
CFSAN025062_1 |
| Library Layout |
PAIRED |
| Library Instrument |
Illumina MiSeq |
| |
|
| SRA Experiment Id |
SRX529967
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007429 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007429 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529968
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007433 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007433 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX2023814
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP31 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX1704864
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP21 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX2023813
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP9 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX1704863
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP28 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX529969
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007440 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007440 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1704862
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP27 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX2023812
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP8 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX2023811
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP1 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX1704861
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP26 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX2023818
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP45 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX2023817
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP44 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX609030
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007447 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007447 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX1704866
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP24 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX2023816
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP41 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX2023815
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP35 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX1704865
(Link to NCBI ) |
| Experiment Title |
FDA-CFSAN: microbial foodborne pathogen research |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
VP23 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
SRX609729
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007435 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007435 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX608996
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN012491 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN012491 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX608995
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007452 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007452 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX608998
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007448 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007448 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX608997
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007445 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007445 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX608999
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007455 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007455 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX529970
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007443 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007443 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX608990
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007458 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007458 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX608992
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN006129 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN006129 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX608991
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007451 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007451 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX608994
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007460 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007460 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
| |
|
| SRA Experiment Id |
SRX608993
(Link to NCBI ) |
| Experiment Title |
Whole genome shotgun sequencing of Vibrio parahaemolyticus str. CFSAN007431 by IonTorrent PGM |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Vibrio parahaemolyticus str. CFSAN007431 shotgun |
| Library Layout |
SINGLE |
| Library Instrument |
ION_TORRENT_PGM |
| Spot Length |
300 |
|
|
Study Abstract
|
Currently encompasses whole genome sequencing of cultured Vibrio parahaemolyticus as part of a surveillance project for the rapid detection foodborne illness outbreaks.
|
|
Alias
|
PRJNA245882
|
|
External Id
|
BioProject=PRJNA245882
|
