|
SRA STUDY
|
|
SRA Study Id
|
ERP013687
(Link to NCBI )
|
|
Study Title
|
Quarterly time series of the microbial community in the San Pedro Channel
|
|
SRA Experiments
|
| SRA Experiment Id |
ERX2145796
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METATRANSCRIPTOMIC |
| Library Selection |
cDNA |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2145795
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METATRANSCRIPTOMIC |
| Library Selection |
cDNA |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2145798
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METATRANSCRIPTOMIC |
| Library Selection |
cDNA |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2145797
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METATRANSCRIPTOMIC |
| Library Selection |
cDNA |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2152107
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2145799
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METATRANSCRIPTOMIC |
| Library Selection |
cDNA |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2152106
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2152109
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2152108
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2145792
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METATRANSCRIPTOMIC |
| Library Selection |
cDNA |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2145791
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METATRANSCRIPTOMIC |
| Library Selection |
cDNA |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2145794
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METATRANSCRIPTOMIC |
| Library Selection |
cDNA |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2145793
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METATRANSCRIPTOMIC |
| Library Selection |
cDNA |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2152103
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2615167
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2615166
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2152105
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2615165
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2152104
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2615164
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2154366
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2615163
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2615162
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2145800
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METATRANSCRIPTOMIC |
| Library Selection |
cDNA |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2145802
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METATRANSCRIPTOMIC |
| Library Selection |
cDNA |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2145801
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METATRANSCRIPTOMIC |
| Library Selection |
cDNA |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2152114
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2145803
(Link to NCBI ) |
| Experiment Title |
Illumina MiSeq paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METATRANSCRIPTOMIC |
| Library Selection |
cDNA |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_MI_SEQ |
| |
|
| SRA Experiment Id |
ERX2152113
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2152110
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2152112
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
| |
|
| SRA Experiment Id |
ERX2152111
(Link to NCBI ) |
| Experiment Title |
Illumina HiSeq 2500 paired end sequencing |
| Exp Library Strategy |
WGS |
| Library Source |
METAGENOMIC |
| Library Selection |
RANDOM |
| Library Name |
unspecified |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2500 |
|
|
Study Abstract
|
This study focuses on human impacts on the microbial community in the San Pedro Channel, California, USA. Surface water was collected from the Port of Los Angeles, Two Harbors (Santa Catalina Island) and the San-Pedro Ocean Time-series (SPOT). Additionally water samples from all sites were incubated with naphthalene and the microbial community composition was analyzed at t0 and at the end of the incubation.
|
|
Alias
|
ena-STUDY-UNIVERSITY OF SOUTHERN CALIFORNIA-22-12-2015-02:29:58:553-190
|
|
External Id
|
BioProject=PRJEB12234
|
