SRA EXPERIMENT
SRA Experiment Id SRX1044252  (Link to NCBI )
Experiment Title Amauroascus niger cDNA paired-end reads
SRA Study
SRA Study Id SRP058869  (Link to NCBI )
Study Title Sequencing of four non-pathogenic Onygenales species
Study Abstract The Ascomycete Onygenales order embraces a diverse group of mammalian pathogens, including the yeast-forming dimorphic fungal pathogens Histoplasma capsulatum, Paracoccidioides spp. and Blastomyces dermatitidis, the dermatophytes Microsporum spp. and Trichopyton spp., the spherule-forming dimorphic fungal pathogens in the genus Coccidioides, and many non-pathogens. Although genomes for all of the aforementioned pathogenic species are available, only one non-pathongen had been sequenced. Here, we add genomes for four non-pathogenic Onygenales species, all of which are more closely related to Coccidioides spp. than any other known Onygenales species. These genomes provide insight to gene family expansion/contraction and patterns of individual gene gain/loss in this diverse order – both major drivers of evolutionary change.
Alias PRJNA284880
External Id BioProject=PRJNA284880
SRA Sample
SRA Sample Id SRS949548  (Link to NCBI )
SRA Run
SRA Run Id SRR2045737  (Link to NCBI )
Spots 163295216
Bases 32659043200
Size 21681069450
Published Date 2015-12-30
Exp Library Strategy RNA-Seq
Library Source TRANSCRIPTOMIC
Library Selection PolyA
Library Name Amauroascus niger cDNA
Library Layout PAIRED
Library Instrument Illumina Genome Analyzer II
Exp. Description
Spot Length 202