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SRA EXPERIMENT
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SRA Experiment Id
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SRX007001
(Link to NCBI )
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Experiment Title
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SRA Study
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SRA Sample
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| SRA Sample Id |
SRS004381
(Link to NCBI ) |
| Sample Title |
Jingjing, a 3-year old female panda |
| NCBI Biosample Id |
SAMN00008160 |
| Sample Description |
We sequenced a 3-year old female panda named Jingjing, who came from the Chengdu Research Base of Giant Panda Breeding and was chosen as the model of 2008 Olympic Mascot. The captive breeding of pandas follows principles meant to maintain genetic polymorphism, so it is difficult to find a homozygous panda because mating of close relatives is not allowed. The genetic background of Jingjing’s father comes solely from pandas in the Liangshan Mountain, and Jingjing’s mother’s genetic background has half from pandas in the Liangshan Mountain and half from the Minshan Mountain. Liangshan and Minshan are the two major locations of wild giant pandas. So Jingjing is a relatively good candidate for sequencing. |
| Scientific Name |
Ailuropoda melanoleuca |
| NCBI Taxonomy Id |
9646 |
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SRA Run
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| SRA Run Id |
SRR019811
(Link to NCBI ) |
| SRA Run Spots |
8033632 |
| SRA Run Bases |
626623296 |
| SRA Run Size |
423386520 |
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Library Name
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PAfwDADDAAPE
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Library Instrument
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ILLUMINA_GENOME_ANALYZER_II
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Exp Library Strategy
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WGS
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Library Source
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GENOMIC
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Library Selection
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RANDOM
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Library Layout
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PAIRED
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