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SRA EXPERIMENT
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SRA Experiment Id
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ERX3863339
(Link to NCBI )
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Experiment Title
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NextSeq 500 paired end sequencing
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SRA Study
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| SRA Study Id |
ERP111578
(Link to NCBI ) |
| Study Title |
A complete Cannabis chromosome assembly reveals adaptive admixture for elevated cannabidiol (CBD) production |
| Study Abstract |
Cannabis has been cultivated for millennia with distinct cultivars providing either fiber and grain or tetrahydrocannabinol. Recent demand for cannabidiol rather than tetrahydrocannabinol has favored the breeding of admixed cultivars with extremely high cannabidiol content. Despite several draft Cannabis genomes, the genomic structure of cannabinoid synthase loci has remained elusive. A genetic map derived from a tetrahydrocannabinol/cannabidiol segregating population and a complete chromosome assembly from a high-cannabidiol cultivar together resolve the linkage of cannabidiolic and tetrahydrocannabinolic acid synthase gene clusters which are associated with transposable elements. High-cannabidiol cultivars appear to have been generated by integrating hemp-type cannabidiolic acid synthase gene clusters into a background of drug-type cannabis. Quantitative trait locus mapping suggests that overall drug potency, however, is associated with other genomic regions needing additional study. |
| Alias |
ena-STUDY-HARVARD OEB-22-10-2018-14:57:01:060-662 |
| External Id |
PRJEB29284 |
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SRA Sample
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SRA Run
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Exp Library Strategy
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WGS
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Library Source
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GENOMIC
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Library Selection
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size fractionation
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Library Name
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unspecified
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Library Layout
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PAIRED
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Library Instrument
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NEXT_SEQ_500
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Exp. Description
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Spot Length
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