SRA Experiment Id ERX3426468  (Link to NCBI )
Experiment Title HiSeq X Ten paired end sequencing
SRA Study
SRA Study Id ERP024601  (Link to NCBI )
Study Title Baby_Biome_Study_gastrointestinal_bacterial_genomes
Study Abstract The study investigates how early microbe exposure and the developing immune system influence subsequent health and developmental outcomes. Culturing efforts coupled with whole genome sequencing of the gastrointestinal bacteria can address key questions that are computationally non-trivial using shotgun metagenomics alone. This comprehensive gut microbiota-derived bacterial genome collection provides the basis to improve the taxonomic classification resolution of metagenomic analysis, and to allow subsequent in vitro and in vivo experiments on host physiology and gut colonisation process. To get a broad and comprehensive coverage of the gut microbiota, we cultivated bacterial species from human faecal samples on different selectice agar media and broth. Samples are whole-genome sequenced on Illumina X10 150bp PE. This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see
Alias Baby_Biome_Study_gastrointestinal_bacterial_genomes-sc-4928
External Id PRJEB22252
SRA Sample
SRA Sample Id ERS2178783  (Link to NCBI )
Title B00002_7_4
SRA Run Id ERR3402703  (Link to NCBI )
Spots 1297655
Bases 391891810
Size 176178185
Published Date 2019-06-28
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name DN508840H:G6
Library Layout PAIRED
Library Instrument
Exp. Description
Spot Length