SRA EXPERIMENT
SRA Experiment Id ERX3190247  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing; qiita_ptid_6188:11176.3x.091515.169.1
SRA Study
SRA Study Id ERP113817  (Link to NCBI )
Study Title Triplicate PCR reactions for 16S rRNA gene amplicon sequencing are unnecessary
Study Abstract Conventional wisdom holds that PCR amplification for sequencing should employ pooled replicate reactions to reduce bias due to jackpot effects and chimera formation. However, modern amplicon data analysis employs methods that may be less sensitive to such artifacts. Here we directly compare results from single versus triplicate reactions for 16S amplicon sequencing and find no significant impact of adopting a less labor-intensive single-reaction protocol.
Alias qiita_sid_11176
External Id BioProject=PRJEB31281
SRA Sample
SRA Sample Id ERS3163890  (Link to NCBI )
SRA Run
SRA Run Id ERR3162163  (Link to NCBI )
Spots 479581
Bases 136875499
Size 82357379
Published Date 2020-02-07
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection PCR
Library Name 11176.3x.091515.169.1
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
Exp. Description
Spot Length