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SRA EXPERIMENT
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SRA Experiment Id
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ERX2252599
(Link to NCBI )
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Experiment Title
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Illumina HiSeq 4000 paired end sequencing; environmental samples_Illumina_DA
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SRA Study
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| SRA Study Id |
ERP090011
(Link to NCBI ) |
| Study Title |
EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods |
| Study Abstract |
This study includes experiments from the following five sequencing strategies: 1) Shotgun DNA sequencing; 2) Amplicon sequencing after 18S amplification by PCR using 1391F/EukB primer set. Library were constructed according to Illumina Library protocol without any sizing; 3) Amplicon sequencing after 16S amplification by PCR using 515F/926R primer set. Library were constructed according to Illumina Library protocol without any sizing; 4) Amplicon sequencing after 16S amplification by PCR using 515F/926R primer set. Library were constructed according to Illumina Library protocol with a sizing step selecting the 450-650 bp fragments; and 5) Amplicon sequencing after 16S amplification by PCR using 515F/926R primer set. Library were constructed according to Illumina Library protocol with a sizing step selecting the 650-850 bp fragments. |
| Alias |
STUDY_BZZ_CAA_CAN_28PG33FMB |
| External Id |
BioProject=PRJEB87662 |
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SRA Sample
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| SRA Sample Id |
ERS1996201
(Link to NCBI ) |
| Title |
EMOSE_201705300746Z_DAY1_PUMP_SRF_(3m)_SEQ-(100L-on-membrane)_W3-20_N040000342 |
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SRA Run
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| SRA Run Id |
ERR2196985
(Link to NCBI ) |
| Spots |
123273135 |
| Bases |
35165049447 |
| Size |
14166378219 |
| Published Date |
2017-11-27 |
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Exp Library Strategy
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WGS
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Library Source
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METAGENOMIC
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Library Selection
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RANDOM
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Library Name
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CAA_DS_DA
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Library Layout
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PAIRED
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Library Instrument
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ILLUMINA_HI_SEQ_4000
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Exp. Description
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Spot Length
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