SRA EXPERIMENT
|
SRA Experiment Id
|
ERX2155723
(Link to NCBI )
|
Experiment Title
|
Illumina HiSeq 4000 paired end sequencing; environmental samples_Illumina_DA
|
SRA Study
|
SRA Study Id |
ERP090011
(Link to NCBI ) |
Study Title |
EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods |
Study Abstract |
This study includes experiments from the following five sequencing strategies: 1) Shotgun DNA sequencing; 2) Amplicon sequencing after 18S amplification by PCR using 1391F/EukB primer set. Library were constructed according to Illumina Library protocol without any sizing; 3) Amplicon sequencing after 16S amplification by PCR using 515F/926R primer set. Library were constructed according to Illumina Library protocol without any sizing; 4) Amplicon sequencing after 16S amplification by PCR using 515F/926R primer set. Library were constructed according to Illumina Library protocol with a sizing step selecting the 450-650 bp fragments; and 5) Amplicon sequencing after 16S amplification by PCR using 515F/926R primer set. Library were constructed according to Illumina Library protocol with a sizing step selecting the 650-850 bp fragments. |
Alias |
STUDY_BZZ_CAA_CAN_28PG33FMB |
External Id |
BioProject=PRJEB87662 |
|
SRA Sample
|
SRA Sample Id |
ERS1871471
(Link to NCBI ) |
Title |
EMOSE_201705310750Z_DAY2_PUMP_SRF_(3m)_SEQ-(100L-on-membrane)_W3-20_N010000830 |
|
SRA Run
|
SRA Run Id |
ERR2098411
(Link to NCBI ) |
Spots |
69501229 |
Bases |
20487908226 |
Size |
10372042080 |
Published Date |
2017-08-22 |
|
Exp Library Strategy
|
WGS
|
Library Source
|
METAGENOMIC
|
Library Selection
|
RANDOM
|
Library Name
|
CAA_DM_DA
|
Library Layout
|
PAIRED
|
Library Instrument
|
ILLUMINA_HI_SEQ_4000
|
Exp. Description
|
|
Spot Length
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|