SRA EXPERIMENT
SRA Experiment Id ERX11430237  (Link to NCBI )
Experiment Title Illumina HiSeq 2500 paired end sequencing
SRA Study
SRA Study Id ERP137976  (Link to NCBI )
Study Title Seasonal changes of genomics in sandy sediments at Svalbard
Study Abstract Svalbard is one of the most extreme environments on Earth with permanently low temperatures and almost 4 months of darkness. Surface sediments (0-2 cm depth) was sampled in Isfjorden. Two stations within 1 km distance were visited in December 2017, February 2018, May 2018, December 2018 and April 2019. To investigate seasonal changes in genomic potential and transcription of the communities, metagenomes and metatranscriptomes from total DNA and RNA were sequenced. One stations RNA was sequenced a second time after removing bacterial 16S rRNA, to improve sequencing depth of mRNA.
Alias eeb37bcd-6f75-45bb-a7ce-2924f4301764
External Id BioProject=PRJEB53193
SRA Sample
SRA Sample Id ERS12117599  (Link to NCBI )
Title surface sediment metatranscriptome
SRA Run
SRA Run Id ERR12047059  (Link to NCBI )
Spots 89036110
Bases 43980064714
Published Date 2023-09-14
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection other
Library Name
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
Exp. Description
Spot Length