SRA EXPERIMENT
SRA Experiment Id ERX1046208  (Link to NCBI )
Experiment Title Illumina MiSeq paired end sequencing
SRA Study
SRA Study Id ERP011106  (Link to NCBI )
Study Title Draft genome of Arthrobacter antarcticus W2
Study Abstract Here we present a draft genome of Arthrobacter antarcticus W2. The strain was isolated from a wall in small Danish Slaughterhouse. We have in a recent publication shown how this strain can be involved in synergistic biofilm formation with other bacterial species isolated from the same environment. Genome sequencing libraries were prepared using the Nextera XT kit (Illumina, USA), according to the manufacturer’s recommendations, followed by sequencing as a part of the flowcell, as 2 × 250-base paired-end reads using the Illumina MiSeq (Illumina, USA) technology. The reads were cleaned and trimmed using CLC Genomics Workbench 7 (CLC bio, Denmark). Cleaned reads were assembled using SPAdes v 3.5.0. Obtained contigs were analyzed by VecScreen, to ensure no primer, phage or transposase contamination occurred in the contigs. Contigs smaller than 500bp were discarded.
Alias ena-STUDY-Universitetsparken 15-23-07-2015-00:33:08:357-177
External Id BioProject=PRJEB9950
SRA Sample
SRA Sample Id ERS797418  (Link to NCBI )
Title Arthrobacter antarcticus; Draft genome of Arthrobacter antarcticus W2
SRA Run
SRA Run Id ERR969250  (Link to NCBI )
Spots 1257719
Bases 757146838
Size 442300692
Published Date 2016-02-02
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection PCR
Library Name unspecified
Library Layout PAIRED
Library Instrument Illumina MiSeq
Exp. Description
Spot Length