SRA EXPERIMENT
SRA Experiment Id DRX084578  (Link to NCBI )
Experiment Title Illumina MiSeq paired end sequencing of SAMD00078851
SRA Study
SRA Study Id DRP004618  (Link to NCBI )
Study Title Metagenomic sequences of the Ofunato Bay 2015
Study Abstract The Ofunato Bay in Iwate Prefecture, Japan, is a deep coastal bay located at the center of the Sanriku Rias coast and considered an economically and environmentally important asset. Here we present the first whole genome sequencing (WGS) study on the microbial communities of the Bay where surface water samples were collected in 2015 from three stations along its length to cover the entire bay. We sequenced 0.2-??m filter fraction, targeting the free-living fraction only, among the sequentially size-fractionated samples of 20.0-, 5.0-, 0.8- and 0.2-??m filters,. As expected, Proteobacteria (Alpha, Beta and Gamma) were the most abundant phyla in the Ofunato Bay followed by Bacteroidetes, Firmicutes, Actinobacteria, Cyanobacteria and Tenericutes. We detected a wide range of heterotrophic bacteria, Archaea and eukaryotic algae. The majority of these bacteria are considered significant in oceans and marine ecology.
Alias DRP004618
External Id BioProject=PRJDB5708
SRA Sample
SRA Sample Id DRS080325  (Link to NCBI )
Title KSt3-Jan15-1m
SRA Run
SRA Run Id DRR090873  (Link to NCBI )
Spots 1273079
Bases 654274722
Size 368706278
Published Date 2018-11-28
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
Exp. Description
Spot Length