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Study

Study Name: Marine sediment microbial communities from Svalbard, Norway

Projects

Biosamples

Organisms

Biosamples: 17 Seq. Projects: 17
STUDY INFORMATION
GOLD Study ID Gs0160796
Study Name Marine sediment microbial communities from Svalbard, Norway
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject Accession
SRA Studies
SRA Study Id ERP137976  (Link to NCBI )
Study Title Seasonal changes of genomics in sandy sediments at Svalbard
Study Abstract Svalbard is one of the most extreme environments on Earth with permanently low temperatures and almost 4 months of darkness. Surface sediments (0-2 cm depth) was sampled in Isfjorden. Two stations within 1 km distance were visited in December 2017, February 2018, May 2018, December 2018 and April 2019. To investigate seasonal changes in genomic potential and transcription of the communities, metagenomes and metatranscriptomes from total DNA and RNA were sequenced. One stations RNA was sequenced a second time after removing bacterial 16S rRNA, to improve sequencing depth of mRNA.
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2022-12-14
Last Modified By
PI Unknown
Description The goal of this study is to investigate seasonal changes in genomic potential and transcription of the communities
Relevance
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Marine
Ecosystem Subtype Coastal
Specific Ecosystem Sediment
Ecosystem Path ID 4045
STUDY COMPOSITION
Number of Biosamples 17
Number of Organisms 0
Number of Seq Projects 17
Number of Analysis Projects 0
Number of Related Studies 0

 

 

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