The following elements will have their visibility changed, please review the list before confirming the visibility change

Study

Study Name: Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome

Projects

Biosamples

Organisms

Biosamples: 0 Seq. Projects: 0
STUDY INFORMATION
GOLD Study ID Gs0154069
Study Name Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
Legacy ER Study ID
Legacy GOLD ID
Added By Supratim Mukherjee on 2021-05-11
Last Modified By Tatiparthi Reddy on 2021-05-12
PI Nikos Kyrpides
Description Assembled human gut metagenomes were obtained from MGnify and previously published studies. Assemblies were performed by original studies using a combination of MEGAHIT and MetaSPAdes. Viral contigs were identified using a custom pipeline we developed featuring the Earth's Virome VPFs, Pfams, VirFinder, and gene strand switch rate. After applying CheckV, 189,680 viral genomes with >50% completeness were identified and form the Metagenomic Gut Virus (MGV) catalogue.
Relevance
Study Information Visibility Public
Metagenomic Study No
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem Host-associated
Ecosystem Category Human
Ecosystem Type Digestive system
Ecosystem Subtype Large intestine
Specific Ecosystem Fecal
STUDY COMPOSITION
Number of Biosamples 0
Number of Organisms 0
Number of Seq Projects 0
Number of Analysis Projects 1
Number of Related Studies 0

 

 

  You are going to add the following user to ALL Sequencing Projects, Biosamples and Analysis Projects that
sit under this study (a cascading permission update).

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to all Sequencing Projects,
Biosamples and Analysis Projects under this study.

 

Contact Name/Email:

Do you want to continue?