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Study

Study Name: Cloud water microbial community from mountain summit, France

Projects

Biosamples

Organisms

Biosamples: 4 Seq. Projects: 4
STUDY INFORMATION
GOLD Study ID Gs0145109
Study Name Cloud water microbial community from mountain summit, France
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id ERP107718  (Link to NCBI )
Study Title Cloud whole metagenomes and metatranscriptomes
Study Abstract Investigation of the cloud water microbial communities of a cloud event through metagenomics/metatranscriptomics. Cloud water samples (3 samples collected consecutively for 5h periods) were collected by impaction from puy de Dôme Mountain atmospheric Observatory (1465 m asl, France) and immediately filtered and stored in RNA Later. Nucleic acid extracts were amplified by MDA using WGA/WTA single cell kit. The Blank sample consisted in sterile water poored in the sampler before sampling, and processed in parallel to the samples, including sequencing. Sequencing was done on Illumina MiSeq 2*300bp.
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2020-01-02
Last Modified By
PI
Description Cloud water microbial community from mountain summit, France
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Freshwater
Ecosystem Subtype Unclassified
Specific Ecosystem Unclassified
STUDY COMPOSITION
Number of Biosamples 4
Number of Organisms 0
Number of Seq Projects 4
Number of Analysis Projects 4
Number of Related Studies 0

 

 

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