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Study

Study Name: Metatranscriptomes of protists Acanthamoeba and Cafeteria infected with their virophages from various locations

Projects

Biosamples

Organisms

Biosamples: 24 Seq. Projects: 24
STUDY INFORMATION
GOLD Study ID Gs0144337
Study Name Metatranscriptomes of protists Acanthamoeba and Cafeteria infected with their virophages from various locations
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2019-08-19
Last Modified By JGI automated process on 2019-09-06
PI Matthias Fischer
Description The goal of this study is to generate time-resolved gene expression profiles for two model systems: 1. amoeba Acanthamoeba castellanii, the giant virus Megavirus chilensis, the virophage Zamilon vitis, and an associated mobile genetic element (transpoviron) referred to as Mvtv and 2. marine heterotrophic nanoflagellate Cafeteria roenbergensis, the giant virus CroV, and the virophage mavirus under different (co-)infection conditions.
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Marine
Ecosystem Subtype Coastal
Specific Ecosystem Unclassified
STUDY COMPOSITION
Number of Biosamples 24
Number of Organisms 0
Number of Seq Projects 24
Number of Analysis Projects 0
Number of Related Studies 0

 

 

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