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Study

Study Name: Phototrophic mat microbial and viral communities from various hot springs in Yellowstone National Park, Wyoming, United States

Projects

Biosamples

Organisms

Biosamples: 447 Seq. Projects: 447
STUDY INFORMATION
GOLD Study ID Gs0135641
Study Name Phototrophic mat microbial and viral communities from various hot springs in Yellowstone National Park, Wyoming, United States
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id SRP191321  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20050624_m2 metagenome
Study Abstract
  
SRA Study Id SRP191322  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050630_ee2 metagenome
Study Abstract
  
SRA Study Id SRP191324  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_me2 metagenome
Study Abstract
  
SRA Study Id SRP213413  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS65 metagenome
Study Abstract
  
SRA Study Id SRP213412  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS60 metagenome
Study Abstract
  
SRA Study Id SRP213411  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090729_R4cd metagenome
Study Abstract
  
SRA Study Id SRP213398  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-MatCore metagenome
Study Abstract
  
SRA Study Id SRP213397  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MSe4 metagenome
Study Abstract
  
SRA Study Id SRP213396  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060911_MSe2 metagenome
Study Abstract
  
SRA Study Id SRP213395  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MSe3 metagenome
Study Abstract
  
SRA Study Id SRP213394  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MS13 metagenome
Study Abstract
  
SRA Study Id SRP213393  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060911_MSe1 metagenome
Study Abstract
  
SRA Study Id SRP213392  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS-M3 metagenome
Study Abstract
  
SRA Study Id SRP213391  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS-M4 metagenome
Study Abstract
  
SRA Study Id SRP213390  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M2 metagenome
Study Abstract
  
SRA Study Id SRP191318  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20040719_149 metagenome
Study Abstract
  
SRA Study Id SRP191319  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20050623_t1 metagenome
Study Abstract
  
SRA Study Id SRP191317  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20040719_148 metagenome
Study Abstract
  
SRA Study Id SRP191332  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_P4 metagenome
Study Abstract
  
SRA Study Id SRP191333  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T9 metagenome
Study Abstract
  
SRA Study Id SRP213409  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS50 metagenome
Study Abstract
  
SRA Study Id SRP191337  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M1 metagenome
Study Abstract
  
SRA Study Id SRP213408  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS65 metagenome
Study Abstract
  
SRA Study Id SRP191334  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS12-60 metagenome
Study Abstract
  
SRA Study Id SRP213407  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS60 metagenome
Study Abstract
  
SRA Study Id SRP213406  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS55 metagenome
Study Abstract
  
SRA Study Id SRP213403  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS50 metagenome
Study Abstract
  
SRA Study Id SRP213402  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-BottomLayer metagenome
Study Abstract
  
SRA Study Id SRP191350  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST1-BottomLayer metagenome
Study Abstract
  
SRA Study Id SRP213388  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS12-65 metagenome
Study Abstract
  
SRA Study Id SRP191329  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T8 metagenome
Study Abstract
  
SRA Study Id SRP191328  (Link to NCBI )
Study Title Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_Pe2 metagenome
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2018-07-12
Last Modified By JGI automated process on 2019-09-06
PI Devaki Bhaya
Description The goal of this study is to explore the genetic diversity in phototrophic cyanobacteria, their dynamic interactions with viral predators, and how such interactions impact phenotype of microbial hosts measured through transcriptomics.
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Thermal springs
Ecosystem Subtype Hot (42-90C)
Specific Ecosystem Unclassified
STUDY COMPOSITION
Number of Biosamples 447
Number of Organisms 0
Number of Seq Projects 447
Number of Analysis Projects 482
Number of Related Studies 0

 

 

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