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Study

Study Name: Transcriptomic responses of beneficial Pseudomonas rhizobacteria to Brachypodium root exudates

Projects

Biosamples

Organisms

Biosamples: 0 Seq. Projects: 48
STUDY INFORMATION
GOLD Study ID Gs0131308
Study Name Transcriptomic responses of beneficial Pseudomonas rhizobacteria to Brachypodium root exudates
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject Accession
SRA Studies
SRA Study Id SRP143367  (Link to NCBI )
Study Title Pseudomonas fluorescens 2-79 transcriptome - 2-79REc
Study Abstract
  
SRA Study Id SRP143366  (Link to NCBI )
Study Title Pseudomonas fluorescens 2-79 transcriptome - 2-79c
Study Abstract
  
SRA Study Id SRP143369  (Link to NCBI )
Study Title Pseudomonas fluorescens 2-79 transcriptome - 2-79b
Study Abstract
  
SRA Study Id SRP143600  (Link to NCBI )
Study Title Pseudomonas brassicacearum Q8r1-96 transcriptome - Q8r1-96c
Study Abstract
  
SRA Study Id SRP143368  (Link to NCBI )
Study Title Pseudomonas fluorescens 2-79 transcriptome - 2-79REb
Study Abstract
  
SRA Study Id SRP143561  (Link to NCBI )
Study Title Pseudomonas protegens Pf-5 transcriptome - Pf-5c
Study Abstract
  
SRA Study Id SRP143385  (Link to NCBI )
Study Title Pseudomonas fluorescens Q2-87 transcriptome - Q2-87REb
Study Abstract
  
SRA Study Id SRP143560  (Link to NCBI )
Study Title Pseudomonas protegens Pf-5 transcriptome - Pf-5b
Study Abstract
  
SRA Study Id SRP143384  (Link to NCBI )
Study Title Pseudomonas fluorescens Q2-87 transcriptome - Q2-87a
Study Abstract
  
SRA Study Id SRP143387  (Link to NCBI )
Study Title Pseudomonas fluorescens Q2-87 transcriptome - Q2-87c
Study Abstract
  
SRA Study Id SRP143386  (Link to NCBI )
Study Title Pseudomonas fluorescens Q2-87 transcriptome - Q2-87REc
Study Abstract
  
SRA Study Id SRP143562  (Link to NCBI )
Study Title Pseudomonas protegens Pf-5 transcriptome - Pf-5REa
Study Abstract
  
SRA Study Id SRP143606  (Link to NCBI )
Study Title Pseudomonas sp. R1-43-08 transcriptome - R1-43-08a
Study Abstract
  
SRA Study Id SRP143605  (Link to NCBI )
Study Title Pseudomonas sp. R1-43-08 transcriptome - R1-43-08REc
Study Abstract
  
SRA Study Id SRP143608  (Link to NCBI )
Study Title Pseudomonas sp. R1-43-08 transcriptome - R1-43-08REa
Study Abstract
  
SRA Study Id SRP143607  (Link to NCBI )
Study Title Pseudomonas sp. R1-43-08 transcriptome - R1-43-08c
Study Abstract
  
SRA Study Id SRP143602  (Link to NCBI )
Study Title Pseudomonas brassicacearum Q8r1-96 transcriptome - Q8r1-96b
Study Abstract
  
SRA Study Id SRP143601  (Link to NCBI )
Study Title Pseudomonas brassicacearum Q8r1-96 transcriptome - Q8r1-96REa
Study Abstract
  
SRA Study Id SRP143604  (Link to NCBI )
Study Title Pseudomonas sp. R1-43-08 transcriptome - R1-43-08REb
Study Abstract
  
SRA Study Id SRP143603  (Link to NCBI )
Study Title Pseudomonas brassicacearum Q8r1-96 transcriptome - Q8r1-96REc
Study Abstract
  
SRA Study Id SRP143380  (Link to NCBI )
Study Title Pseudomonas fluorescens Pf0-1 transcriptome - Pf0-1REb
Study Abstract
  
SRA Study Id SRP143383  (Link to NCBI )
Study Title Pseudomonas fluorescens Q2-87 transcriptome - Q2-87b
Study Abstract
  
SRA Study Id SRP143382  (Link to NCBI )
Study Title Pseudomonas fluorescens Q2-87 transcriptome - Q2-87REa
Study Abstract
  
SRA Study Id SRP143598  (Link to NCBI )
Study Title Pseudomonas brassicacearum Q8r1-96 transcriptome - Q8r1-96REb
Study Abstract
  
SRA Study Id SRP143378  (Link to NCBI )
Study Title Pseudomonas fluorescens Pf0-1 transcriptome - Pf0-1a
Study Abstract
  
SRA Study Id SRP143597  (Link to NCBI )
Study Title Pseudomonas fluorescens SBW25 transcriptome - SBW25REb
Study Abstract
  
SRA Study Id SRP143377  (Link to NCBI )
Study Title Pseudomonas fluorescens Pf0-1 transcriptome - Pf0-1REc
Study Abstract
  
SRA Study Id SRP143611  (Link to NCBI )
Study Title Pseudomonas chlororaphis 30-84 transcriptome - 30-84c
Study Abstract
  
SRA Study Id SRP143599  (Link to NCBI )
Study Title Pseudomonas brassicacearum Q8r1-96 transcriptome - Q8r1-96a
Study Abstract
  
SRA Study Id SRP143610  (Link to NCBI )
Study Title Pseudomonas chlororaphis 30-84 transcriptome - 30-84b
Study Abstract
  
SRA Study Id SRP143379  (Link to NCBI )
Study Title Pseudomonas fluorescens Pf0-1 transcriptome - Pf0-1b
Study Abstract
  
SRA Study Id SRP143594  (Link to NCBI )
Study Title Pseudomonas fluorescens SBW25 transcriptome - SBW25REa
Study Abstract
  
SRA Study Id SRP143593  (Link to NCBI )
Study Title Pseudomonas fluorescens SBW25 transcriptome - SBW25a
Study Abstract
  
SRA Study Id SRP143376  (Link to NCBI )
Study Title Pseudomonas fluorescens Pf0-1 transcriptome - Pf0-1REa
Study Abstract
  
SRA Study Id SRP143596  (Link to NCBI )
Study Title Pseudomonas fluorescens SBW25 transcriptome - SBW25REc
Study Abstract
  
SRA Study Id SRP143375  (Link to NCBI )
Study Title Pseudomonas fluorescens Pf0-1 transcriptome - Pf0-1c
Study Abstract
  
SRA Study Id SRP143595  (Link to NCBI )
Study Title Pseudomonas fluorescens SBW25 transcriptome - SBW25c
Study Abstract
  
SRA Study Id SRP143616  (Link to NCBI )
Study Title Pseudomonas sp. R1-43-08 transcriptome - R1-43-08b
Study Abstract
  
SRA Study Id SRP143558  (Link to NCBI )
Study Title Pseudomonas protegens Pf-5 transcriptome - Pf-5a
Study Abstract
  
SRA Study Id SRP143613  (Link to NCBI )
Study Title Pseudomonas chlororaphis 30-84 transcriptome - 30-84REb
Study Abstract
  
SRA Study Id SRP143612  (Link to NCBI )
Study Title Pseudomonas chlororaphis 30-84 transcriptome - 30-84REa
Study Abstract
  
SRA Study Id SRP143557  (Link to NCBI )
Study Title Pseudomonas protegens Pf-5 transcriptome - Pf-5REb
Study Abstract
  
SRA Study Id SRP143615  (Link to NCBI )
Study Title Pseudomonas chlororaphis 30-84 transcriptome - 30-84REc
Study Abstract
  
SRA Study Id SRP143614  (Link to NCBI )
Study Title Pseudomonas chlororaphis 30-84 transcriptome - 30-84a
Study Abstract
  
SRA Study Id SRP143559  (Link to NCBI )
Study Title Pseudomonas protegens Pf-5 transcriptome - Pf-5REc
Study Abstract
  
SRA Study Id SRP143370  (Link to NCBI )
Study Title Pseudomonas fluorescens 2-79 transcriptome - 2-79REa
Study Abstract
  
SRA Study Id SRP143592  (Link to NCBI )
Study Title Pseudomonas fluorescens SBW25 transcriptome - SBW25b
Study Abstract
  
SRA Study Id SRP143371  (Link to NCBI )
Study Title Pseudomonas fluorescens 2-79 transcriptome - 2-79a
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2017-09-29
Last Modified By JGI automated process on 2019-09-06
PI Dmitri Mavrodi
Description Transcriptomic responses of beneficial Pseudomonas rhizobacteria to Brachypodium root exudates
Relevance
Study Information Visibility Public
Metagenomic Study No
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem
Ecosystem Category
Ecosystem Type
Ecosystem Subtype
Specific Ecosystem
Ecosystem Path ID 1
STUDY COMPOSITION
Number of Biosamples 0
Number of Organisms 8
Number of Seq Projects 48
Number of Analysis Projects 36
Number of Related Studies 0

 

 

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