The following elements will have their visibility changed, please review the list before confirming the visibility change

Study

Study Name: Single-cell genome sequencing of abundant and uncultured lineages of bacteria from freshwater lakes in Wisconsin, USA

Projects

Biosamples

Organisms

Biosamples: 0 Seq. Projects: 94
STUDY INFORMATION
GOLD Study ID Gs0129090
Study Name Single-cell genome sequencing of abundant and uncultured lineages of bacteria from freshwater lakes in Wisconsin, USA
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id SRP232999  (Link to NCBI )
Study Title Betaproteobacteria bacterium strain:JGI_MCM14TBH016 Genome sequencing
Study Abstract
  
SRA Study Id SRP233004  (Link to NCBI )
Study Title Verrucomicrobia bacterium strain:verl-B JGI_MCM14ME089 Genome sequencing
Study Abstract
  
SRA Study Id SRP233125  (Link to NCBI )
Study Title Planctomycetes bacterium strain:JGI_MCM14ME059 Genome sequencing
Study Abstract
  
SRA Study Id SRP233047  (Link to NCBI )
Study Title Verrucomicrobia bacterium strain:verI-A JGI_MCM14ME069 Genome sequencing
Study Abstract
  
SRA Study Id SRP233124  (Link to NCBI )
Study Title Chlorobi bacterium strain:JGI_MCM14TBH067 Genome sequencing
Study Abstract
  
SRA Study Id SRP233123  (Link to NCBI )
Study Title Polynucleobacter sp. JGI_MCM14TBH008 Genome sequencing
Study Abstract
  
SRA Study Id SRP233001  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acIV-C JGI_MCM14ME150 Genome sequencing
Study Abstract
  
SRA Study Id SRP233089  (Link to NCBI )
Study Title Verrucomicrobia bacterium strain:verI-A JGI_MCM14ME047 Genome sequencing
Study Abstract
  
SRA Study Id SRP233122  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acTH1-A JGI_MCM14ME001 Genome sequencing
Study Abstract
  
SRA Study Id SRP233008  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acIV-C JGI_MCM14ME163 Genome sequencing
Study Abstract
  
SRA Study Id SRP232997  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-C JGI_MCM14ME008 Genome sequencing
Study Abstract
  
SRA Study Id SRP233129  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-B JGI_MCM14ME025 Genome sequencing
Study Abstract
  
SRA Study Id SRP233127  (Link to NCBI )
Study Title Acidobacteria bacterium strain:JGI_MCM14TBH014 Genome sequencing
Study Abstract
  
SRA Study Id SRP233006  (Link to NCBI )
Study Title Betaproteobacteria bacterium strain:JGI_MCM14ME238 Genome sequencing
Study Abstract
  
SRA Study Id SRP233126  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acSTL-A JGI_MCM14ME264 Genome sequencing
Study Abstract
  
SRA Study Id SRP233005  (Link to NCBI )
Study Title Verrucomicrobia bacterium strain:LD19 JGI_MCM14ME022 Genome sequencing
Study Abstract
  
SRA Study Id SRP232994  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-A JGI_MCM14ME145 Genome sequencing
Study Abstract
  
SRA Study Id SRP233082  (Link to NCBI )
Study Title Limnohabitans sp. JGI_MCM14ME184 Genome sequencing
Study Abstract
  
SRA Study Id SRP233081  (Link to NCBI )
Study Title Proteobacteria bacterium strain:betI-B JGI_MCM14TBH049 Genome sequencing
Study Abstract
  
SRA Study Id SRP233121  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-B JGI_MCM14ME048 Genome sequencing
Study Abstract
  
SRA Study Id SRP233086  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-A JGI_MCM14ME051 Genome sequencing
Study Abstract
  
SRA Study Id SRP233041  (Link to NCBI )
Study Title Chlorobi bacterium strain:JGI_MCM14TBH085 Genome sequencing
Study Abstract
  
SRA Study Id SRP233080  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acIV-A JGI_MCM14ME165 Genome sequencing
Study Abstract
  
SRA Study Id SRP233119  (Link to NCBI )
Study Title Verrucomicrobia bacterium strain:verI-A JGI_MCM14ME158 Genome sequencing
Study Abstract
  
SRA Study Id SRP233114  (Link to NCBI )
Study Title Planctomycetes bacterium strain:JGI_MCM14ME068 Genome sequencing
Study Abstract
  
SRA Study Id SRP233113  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-A JGI_MCM14ME049 Genome sequencing
Study Abstract
  
SRA Study Id SRP233079  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-B JGI_MCM14TBH026 Genome sequencing
Study Abstract
  
SRA Study Id SRP233112  (Link to NCBI )
Study Title Verrucomicrobia bacterium strain:verI-A JGI_MCM14ME135 Genome sequencing
Study Abstract
  
SRA Study Id SRP233111  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acIV-B JGI_MCM14ME194 Genome sequencing
Study Abstract
  
SRA Study Id SRP233078  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-C JGI_MCM14ME034 Genome sequencing
Study Abstract
  
SRA Study Id SRP233118  (Link to NCBI )
Study Title Planctomycetes bacterium strain:JGI_MCM14ME087 Genome sequencing
Study Abstract
  
SRA Study Id SRP233117  (Link to NCBI )
Study Title Betaproteobacteria bacterium strain:JGI_MCM14ME221 Genome sequencing
Study Abstract
  
SRA Study Id SRP233116  (Link to NCBI )
Study Title Verrucomicrobia bacterium strain:verI-A JGI_MCM14ME061 Genome sequencing
Study Abstract
  
SRA Study Id SRP233039  (Link to NCBI )
Study Title Polynucleobacter sp. JGI_MCM14TBH076 Genome sequencing
Study Abstract
  
SRA Study Id SRP233115  (Link to NCBI )
Study Title Betaproteobacteria bacterium strain:JGI_MCM14ME284 Genome sequencing
Study Abstract
  
SRA Study Id SRP233073  (Link to NCBI )
Study Title Polynucleobacter sp. JGI_MCM14ME153 Genome sequencing
Study Abstract
  
SRA Study Id SRP233072  (Link to NCBI )
Study Title Acidobacteria bacterium strain:JGI_MCM14TBH018 Genome sequencing
Study Abstract
  
SRA Study Id SRP233071  (Link to NCBI )
Study Title Chlorobi bacterium strain:JGI_MCM14TBH012 Genome sequencing
Study Abstract
  
SRA Study Id SRP233070  (Link to NCBI )
Study Title Proteobacteria bacterium strain:alfIII-A JGI_MCM14ME152 Genome sequencing
Study Abstract
  
SRA Study Id SRP233077  (Link to NCBI )
Study Title Limnohabitans sp. JGI_MCM14ME254 Genome sequencing
Study Abstract
  
SRA Study Id SRP233033  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acIV-B JGI_MCM14ME129 Genome sequencing
Study Abstract
  
SRA Study Id SRP233076  (Link to NCBI )
Study Title Planctomycetes bacterium strain:JGI_MCM14ME028 Genome sequencing
Study Abstract
  
SRA Study Id SRP233031  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-B JGI_MCM14TBH075 Genome sequencing
Study Abstract
  
SRA Study Id SRP233075  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-C JGI_MCM14ME114 Genome sequencing
Study Abstract
  
SRA Study Id SRP233030  (Link to NCBI )
Study Title Verrucomicrobia bacterium strain:JGI_MCM14ME258 Genome sequencing
Study Abstract
  
SRA Study Id SRP233109  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acIV-B JGI_MCM14ME186 Genome sequencing
Study Abstract
  
SRA Study Id SRP233108  (Link to NCBI )
Study Title Planctomycetes bacterium strain:JGI_MCM14ME042 Genome sequencing
Study Abstract
  
SRA Study Id SRP233147  (Link to NCBI )
Study Title Polynucleobacter sp. JGI_MCM14TBH064 Genome sequencing
Study Abstract
  
SRA Study Id SRP233103  (Link to NCBI )
Study Title Polynucleobacter sp. JGI_MCM14TBH079 Genome sequencing
Study Abstract
  
SRA Study Id SRP233146  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-B JGI_MCM14TBH061 Genome sequencing
Study Abstract
  
SRA Study Id SRP233069  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-C JGI_MCM14ME077 Genome sequencing
Study Abstract
  
SRA Study Id SRP233102  (Link to NCBI )
Study Title Polynucleobacter sp. JGI_MCM14TBH005 Genome sequencing
Study Abstract
  
SRA Study Id SRP233068  (Link to NCBI )
Study Title Verrucomicrobia bacterium strain:verI-A JGI_MCM14ME215 Genome sequencing
Study Abstract
  
SRA Study Id SRP233101  (Link to NCBI )
Study Title Verrucomicrobia bacterium strain:LD19 JGI_MCM14ME111 Genome sequencing
Study Abstract
  
SRA Study Id SRP233145  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-C JGI_MCM14ME133 Genome sequencing
Study Abstract
  
SRA Study Id SRP233067  (Link to NCBI )
Study Title Limnohabitans sp. JGI_MCM14ME275 Genome sequencing
Study Abstract
  
SRA Study Id SRP233100  (Link to NCBI )
Study Title Betaproteobacteria bacterium strain:JGI_MCM14ME279 Genome sequencing
Study Abstract
  
SRA Study Id SRP233144  (Link to NCBI )
Study Title Verrucomicrobia bacterium strain:JGI_MCM14ME267 Genome sequencing
Study Abstract
  
SRA Study Id SRP233107  (Link to NCBI )
Study Title Polynucleobacter sp. JGI_MCM14TBH017 Genome sequencing
Study Abstract
  
SRA Study Id SRP233106  (Link to NCBI )
Study Title Acidobacteria bacterium strain:JGI_MCM14TBH024 Genome sequencing
Study Abstract
  
SRA Study Id SRP233105  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-B JGI_MCM14TBH043 Genome sequencing
Study Abstract
  
SRA Study Id SRP233148  (Link to NCBI )
Study Title Proteobacteria bacterium strain:LD28 JGI_MCM14TBH083 Genome sequencing
Study Abstract
  
SRA Study Id SRP233104  (Link to NCBI )
Study Title Limnohabitans sp. JGI_MCM14ME171 Genome sequencing
Study Abstract
  
SRA Study Id SRP233143  (Link to NCBI )
Study Title Verrucomicrobia bacterium strain:verI-A JGI_MCM14ME192 Genome sequencing
Study Abstract
  
SRA Study Id SRP233066  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-A JGI_MCM14ME217 Genome sequencing
Study Abstract
  
SRA Study Id SRP233142  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acIV-B JGI_MCM14ME188 Genome sequencing
Study Abstract
  
SRA Study Id SRP233065  (Link to NCBI )
Study Title Limnohabitans sp. JGI_MCM14TBH003 Genome sequencing
Study Abstract
  
SRA Study Id SRP233064  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acIV-B JGI_MCM14ME141 Genome sequencing
Study Abstract
  
SRA Study Id SRP233141  (Link to NCBI )
Study Title Actinobacteria bacterium strain:JGI_MCM14ME201 Genome sequencing
Study Abstract
  
SRA Study Id SRP233140  (Link to NCBI )
Study Title Proteobacteria bacterium strain:betI-B JGI_MCM14TBH062 Genome sequencing
Study Abstract
  
SRA Study Id SRP233136  (Link to NCBI )
Study Title Chlorobi bacterium strain:JGI_MCM14TBH044 Genome sequencing
Study Abstract
  
SRA Study Id SRP233014  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acTH1-A JGI_MCM14ME106 Genome sequencing
Study Abstract
  
SRA Study Id SRP233135  (Link to NCBI )
Study Title Betaproteobacteria bacterium strain:JGI_MCM14ME259 Genome sequencing
Study Abstract
  
SRA Study Id SRP233134  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-A JGI_MCM14ME105 Genome sequencing
Study Abstract
  
SRA Study Id SRP233133  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acIV-B JGI_MCM14ME187 Genome sequencing
Study Abstract
  
SRA Study Id SRP233019  (Link to NCBI )
Study Title Acidobacteria bacterium strain:JGI_MCM14TBH040 Genome sequencing
Study Abstract
  
SRA Study Id SRP233018  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acIV-A JGI_MCM14ME173 Genome sequencing
Study Abstract
  
SRA Study Id SRP233017  (Link to NCBI )
Study Title Polynucleobacter sp. JGI_MCM14ME033 Genome sequencing
Study Abstract
  
SRA Study Id SRP233137  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acIV-A JGI_MCM14ME176 Genome sequencing
Study Abstract
  
SRA Study Id SRP233412  (Link to NCBI )
Study Title Limnohabitans sp. JGI_MCM14ME290 Genome sequencing
Study Abstract
  
SRA Study Id SRP233095  (Link to NCBI )
Study Title Betaproteobacteria bacterium strain:JGI_MCM14ME250 Genome sequencing
Study Abstract
  
SRA Study Id SRP233094  (Link to NCBI )
Study Title Proteobacteria bacterium strain:alfIII-A JGI_MCM14ME193 Genome sequencing
Study Abstract
  
SRA Study Id SRP233093  (Link to NCBI )
Study Title Proteobacteria bacterium strain:LD28 JGI_MCM14TBH053 Genome sequencing
Study Abstract
  
SRA Study Id SRP233092  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-C JGI_MCM14ME182 Genome sequencing
Study Abstract
  
SRA Study Id SRP233011  (Link to NCBI )
Study Title Proteobacteria bacterium strain:LD28 JGI_MCM14ME026 Genome sequencing
Study Abstract
  
SRA Study Id SRP233099  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acIV-A JGI_MCM14ME169 Genome sequencing
Study Abstract
  
SRA Study Id SRP233098  (Link to NCBI )
Study Title Proteobacteria bacterium strain:alfIII-A JGI_MCM14ME142 Genome sequencing
Study Abstract
  
SRA Study Id SRP233131  (Link to NCBI )
Study Title Betaproteobacteria bacterium strain:JGI_MCM14TBH028 Genome sequencing
Study Abstract
  
SRA Study Id SRP233010  (Link to NCBI )
Study Title Verrucomicrobia bacterium strain:JGI_MCM14TBH032 Genome sequencing
Study Abstract
  
SRA Study Id SRP233097  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-B JGI_MCM14ME065 Genome sequencing
Study Abstract
  
SRA Study Id SRP233130  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-C JGI_MCM14ME159 Genome sequencing
Study Abstract
  
SRA Study Id SRP233096  (Link to NCBI )
Study Title Actinobacteria bacterium strain:acI-C JGI_MCM14ME097 Genome sequencing
Study Abstract
  
SRA Study Id SRP233090  (Link to NCBI )
Study Title Proteobacteria bacterium strain:LD28 JGI_MCM14ME191 Genome sequencing
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By Supratim Mukherjee on 2017-05-22
Last Modified By JGI automated process on 2019-09-06
PI Katherine McMahon
Description Single-cell amplified genomes (SAGs) from abundant and yet uncultured lineages of freshwater bacteria, predominantly from the Actinobacterial, Verrucomicrobia and Betaproteobacteria lineages. Samples were collected from Lake Mendota and Trout Bog Lake in Wisconsin, USA
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study No
Publication
Is GEBA No
Is HMP No
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Freshwater
Ecosystem Subtype Lake
Specific Ecosystem Unclassified
STUDY COMPOSITION
Number of Biosamples 0
Number of Organisms 94
Number of Seq Projects 94
Number of Analysis Projects 94
Number of Related Studies 0

 

 

  You are going to add the following user to ALL Sequencing Projects, Biosamples and Analysis Projects that
sit under this study (a cascading permission update).

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to all Sequencing Projects,
Biosamples and Analysis Projects under this study.

 

Contact Name/Email:

Do you want to continue?