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Study

Study Name: Studying microbial cell-cell associations in a wide range of aquatic ecosystems

Projects

Biosamples

Organisms

Biosamples: 451 Seq. Projects: 452
STUDY INFORMATION
GOLD Study ID Gs0128957
Study Name Studying microbial cell-cell associations in a wide range of aquatic ecosystems
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id SRP228514  (Link to NCBI )
Study Title Activated sludge microbial communities from WWTP in Nijmegen, Gelderland, Netherland - WWTP Weurt metagenome
Study Abstract
  
SRA Study Id SRP228515  (Link to NCBI )
Study Title Activated sludge microbial communities from bioreactor in Nijmegen, Gelderland, Netherland - NOB reactor metagenome
Study Abstract
  
SRA Study Id SRP228626  (Link to NCBI )
Study Title Metatranscriptome of activated sludge microbial communities from WWTP in Nijmegen, Gelderland, Netherland - WWTP Weurt
Study Abstract
  
SRA Study Id SRP275506  (Link to NCBI )
Study Title Seawater microbial communities from Basse-Terre, Guadeloupe - Chloroflexi metagenome
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2017-04-19
Last Modified By Galina Ovchinnikova on 2020-12-01
PI Tanja Woyke
Description The goal of the study is to understand interdependencies between microbes that affect community assembly, structure, function, and evolution. These interactions are very difficult to disentangle from bulk community data provided by metagenomics, and difficult to reconstruct with cultured isolates. The targets of this study are associations where two or more cells are physically attached to each other and involved in an intimate, sustained, and possibly coevolved interaction.
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Marine
Ecosystem Subtype Unclassified
Specific Ecosystem Unclassified
STUDY COMPOSITION
Number of Biosamples 451
Number of Organisms 0
Number of Seq Projects 452
Number of Analysis Projects 452
Number of Related Studies 0

 

 

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