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Study

Study Name: Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico

Projects

Biosamples

Organisms

Biosamples: 11 Seq. Projects: 11
STUDY INFORMATION
GOLD Study ID Gs0127394
Study Name Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id SRP130035  (Link to NCBI )
Study Title Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay12, Core 4567-28, 21-24 cm metagenome
Study Abstract
  
SRA Study Id SRP130034  (Link to NCBI )
Study Title Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cm metagenome
Study Abstract
  
SRA Study Id SRP130036  (Link to NCBI )
Study Title Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay9, Core 4571-4, 0-3 cm metagenome
Study Abstract
  
SRA Study Id SRP134685  (Link to NCBI )
Study Title Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay17, Core 4571-4, 12-15 cm metagenome
Study Abstract
  
SRA Study Id SRP134684  (Link to NCBI )
Study Title Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay15, Core 4569-2, 21-24 cm metagenome
Study Abstract
  
SRA Study Id SRP134683  (Link to NCBI )
Study Title Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay16, Core 4569-2, 12-15 cm metagenome
Study Abstract
  
SRA Study Id SRP134682  (Link to NCBI )
Study Title Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay13, Core 4488-10 , 4-6 cm metagenome
Study Abstract
  
SRA Study Id SRP129934  (Link to NCBI )
Study Title Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cm metagenome
Study Abstract
  
SRA Study Id SRP129932  (Link to NCBI )
Study Title Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay6, Core 4569-2, 0-3 cm metagenome
Study Abstract
  
SRA Study Id SRP129925  (Link to NCBI )
Study Title Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay1, Core 4569-9, 0-3 cm metagenome
Study Abstract
  
SRA Study Id SRP129924  (Link to NCBI )
Study Title Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay2, Core 4569-9, 9-12 cm metagenome
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2016-12-20
Last Modified By JGI automated process on 2019-06-18
PI Nina Dombrowski
Description Subseafloor sediments represent one of the largest reservoirs for microbial life and carbon on the planet that are essential for biogeochemical nutrient cycling. The Guaymas Basin sediments are located in the Gulf of California and are hydrothermally influenced by volcanic dikes that transform the deposited carbon into complex petroleum hydrocarbons, low-molecular weight organic acids and ammonia. Additionally, these sediments are characterized by high methane concentrations; therefore, anaerobic oxidation of methane (AOM) is one characteristic metabolic process of Guaymas Basin sediments carried out by anaerobic methanotrophic (ANME). Another typical feature of this location is the presence of dense bacterial mats on the sediment surface, consisting of the filamentous, sulfur-oxidizing bacterium Beggiatoa. This study involves sequencing samples from the Guaymas Basin sediment cores that cover a range of depths from 0-40 cm with different geochemical profiles and temperature regimes.
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Marine
Ecosystem Subtype Hydrothermal vents
Specific Ecosystem Sediment
STUDY COMPOSITION
Number of Biosamples 11
Number of Organisms 0
Number of Seq Projects 11
Number of Analysis Projects 675
Number of Related Studies 0

 

 

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