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Study

Study Name: Phycosphere-associated microbial communities from algal ponds

Projects

Biosamples

Organisms

Biosamples: 73 Seq. Projects: 99
STUDY INFORMATION
GOLD Study ID Gs0126276
Study Name Phycosphere-associated microbial communities from algal ponds
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject Accession
SRA Studies
SRA Study Id SRP141540  (Link to NCBI )
Study Title Arenibacter sp. ARW7G5Y1 Genome sequencing
Study Abstract
  
SRA Study Id SRP141542  (Link to NCBI )
Study Title Oceanicaulis sp. PT13A Genome sequencing
Study Abstract
  
SRA Study Id SRP141543  (Link to NCBI )
Study Title Algoriphagus sp. ARW1R1 Genome sequencing
Study Abstract
  
SRA Study Id SRP259876  (Link to NCBI )
Study Title Metatranscriptome of phycosphere-associated microbial communities from LLNL, Livermore, CA, United States - Pt_6CLA_filter_B
Study Abstract
  
SRA Study Id SRP259874  (Link to NCBI )
Study Title Metatranscriptome of phycosphere-associated microbial communities from LLNL, Livermore, CA, United States - Pt_3-2_filter_C
Study Abstract
  
SRA Study Id SRP159310  (Link to NCBI )
Study Title Alcanivorax sp. EA2 Genome sequencing
Study Abstract
  
SRA Study Id SRP259875  (Link to NCBI )
Study Title Metatranscriptome of phycosphere-associated microbial communities from LLNL, Livermore, CA, United States - Pt_6CLA_filter_A
Study Abstract
  
SRA Study Id SRP246529  (Link to NCBI )
Study Title Sulfitobacter sp. N5S Genome sequencing
Study Abstract
  
SRA Study Id SRP246528  (Link to NCBI )
Study Title Roseobacter sp. N2S Genome sequencing
Study Abstract
  
SRA Study Id SRP259872  (Link to NCBI )
Study Title Metatranscriptome of phycosphere-associated microbial communities from LLNL, Livermore, CA, United States - Pt_3-2_filter_B
Study Abstract
  
SRA Study Id SRP259871  (Link to NCBI )
Study Title Metatranscriptome of phycosphere-associated microbial communities from LLNL, Livermore, CA, United States - Pt_3-2_filter_A
Study Abstract
  
SRA Study Id SRP178758  (Link to NCBI )
Study Title Marinobacter sp. 3-2 Genome sequencing
Study Abstract
  
SRA Study Id SRP137886  (Link to NCBI )
Study Title Loktanella sp. PT4BL Genome sequencing
Study Abstract
  
SRA Study Id SRP282742  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW9_20151027 metagenome
Study Abstract
  
SRA Study Id SRP246527  (Link to NCBI )
Study Title Muricauda sp. ARW1Y1 Genome sequencing
Study Abstract
  
SRA Study Id SRP282747  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW9_20151111 metagenome
Study Abstract
  
SRA Study Id SRP112171  (Link to NCBI )
Study Title Arthrobacter sp. P2b Genome sequencing
Study Abstract
  
SRA Study Id SRP282749  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW9_20151117 metagenome
Study Abstract
  
SRA Study Id SRP112172  (Link to NCBI )
Study Title Methylobacterium sp. B4 strain:B4 Genome sequencing
Study Abstract
  
SRA Study Id SRP282748  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW9_20151124 metagenome
Study Abstract
  
SRA Study Id SRP112170  (Link to NCBI )
Study Title Novosphingobium sp. B1 strain:B1 Genome sequencing
Study Abstract
  
SRA Study Id SRP112175  (Link to NCBI )
Study Title Alteromonas sp. I10 Genome sequencing
Study Abstract
  
SRA Study Id SRP112173  (Link to NCBI )
Study Title Ruegeria sp. P4 strain:P4 Genome sequencing
Study Abstract
  
SRA Study Id SRP112174  (Link to NCBI )
Study Title Arthrobacter sp. B3 strain:B3 Genome sequencing
Study Abstract
  
SRA Study Id SRP231698  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from Cellana algal ponds in Kailua-Kona, Hawaii, USA - Cellana AP2-4-25 metagenome pilot
Study Abstract
  
SRA Study Id SRP231654  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from TAMU algal ponds, Corpus Christi, Texas, USA - TAMU ARW1 11/11 metagenome pilot
Study Abstract
  
SRA Study Id SRP231699  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal ponds in Kailua-Kona, Hawaii, USA - Cellana AP2-5-5 metagenome pilot
Study Abstract
  
SRA Study Id SRP141679  (Link to NCBI )
Study Title Oceanicaulis sp. PT4D Genome sequencing
Study Abstract
  
SRA Study Id SRP231653  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from TAMU algal ponds, Corpus Christi, Texas, USA - TAMU ARW-7 10/27 metagenome pilot
Study Abstract
  
SRA Study Id SRP259880  (Link to NCBI )
Study Title Metatranscriptome of phycosphere-associated microbial communities from LLNL, Livermore, CA, United States - Pt_6CLA_filter_C
Study Abstract
  
SRA Study Id SRP159308  (Link to NCBI )
Study Title Tepidicaulis sp. EA10 Genome sequencing
Study Abstract
  
SRA Study Id SRP282750  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW9_20151102 metagenome
Study Abstract
  
SRA Study Id SRP282752  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW9_20151207 metagenome
Study Abstract
  
SRA Study Id SRP282751  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW9_20151203 metagenome
Study Abstract
  
SRA Study Id SRP282753  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW9_20151215 metagenome
Study Abstract
  
SRA Study Id SRP282756  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW7_20151027 metagenome
Study Abstract
  
SRA Study Id SRP159309  (Link to NCBI )
Study Title Pusillimonas sp. EA3 Genome sequencing
Study Abstract
  
SRA Study Id SRP282758  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW7_20151111 metagenome
Study Abstract
  
SRA Study Id SRP282757  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW7_20151102 metagenome
Study Abstract
  
SRA Study Id SRP282760  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW7_20151117 metagenome
Study Abstract
  
SRA Study Id SRP282763  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW7_20151124 metagenome
Study Abstract
  
SRA Study Id SRP282765  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW1_20151102 metagenome
Study Abstract
  
SRA Study Id SRP282764  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW1_20151027 metagenome
Study Abstract
  
SRA Study Id SRP282767  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW1_20151111 metagenome
Study Abstract
  
SRA Study Id SRP282766  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW7_20151203 metagenome
Study Abstract
  
SRA Study Id SRP282769  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW1_20151203 metagenome
Study Abstract
  
SRA Study Id SRP282768  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW1_20151124 metagenome
Study Abstract
  
SRA Study Id SRP141530  (Link to NCBI )
Study Title Rhodobacteraceae bacterium PT6CLA Genome sequencing
Study Abstract
  
SRA Study Id SRP141531  (Link to NCBI )
Study Title Marinobacter sp. PT19DW Genome sequencing
Study Abstract
  
SRA Study Id SRP141532  (Link to NCBI )
Study Title Labrenzia sp. PT13C1 Genome sequencing
Study Abstract
  
SRA Study Id SRP141537  (Link to NCBI )
Study Title Devosia sp. PTEAB7WZ Genome sequencing
Study Abstract
  
SRA Study Id SRP141538  (Link to NCBI )
Study Title Hyphomonadaceae bacterium PT6ES Genome sequencing
Study Abstract
  
SRA Study Id SRP141533  (Link to NCBI )
Study Title Muricauda sp. ARW7G5W Genome sequencing
Study Abstract
  
SRA Study Id SRP141534  (Link to NCBI )
Study Title Thalassospira sp. 11-3 Genome sequencing
Study Abstract
  
SRA Study Id SRP141536  (Link to NCBI )
Study Title Stappia sp. ARW1T Genome sequencing
Study Abstract
  
SRA Study Id SRP282770  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - ARW1_20151117 metagenome
Study Abstract
  
SRA Study Id SRP282772  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - Pt-27 metagenome
Study Abstract
  
SRA Study Id SRP282774  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - Pt17-4 metagenome
Study Abstract
  
SRA Study Id SRP282773  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - Pt-14 metagenome
Study Abstract
  
SRA Study Id SRP282776  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - Pt-7 metagenome
Study Abstract
  
SRA Study Id SRP282775  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - Pt-17 metagenome
Study Abstract
  
SRA Study Id SRP282777  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - Pt-4 metagenome
Study Abstract
  
SRA Study Id SRP282779  (Link to NCBI )
Study Title Phycosphere-associated microbial communities from algal raceway, Corpus Christi, Texas, United States - Pt-25 metagenome
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2016-12-02
Last Modified By Jagadish Sundaramurthi on 2019-12-16
PI Xavier Mayali
Description Understanding the mechanisms of interaction between microalgae and bacteria (including mutualistic, parasitic, commensal), and how these interactions affect the reliability of microalgae-based biofuel production.
Relevance
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Freshwater
Ecosystem Subtype Pond
Specific Ecosystem Unclassified
Ecosystem Path ID 4380
STUDY COMPOSITION
Number of Biosamples 73
Number of Organisms 26
Number of Seq Projects 99
Number of Analysis Projects 142
Number of Related Studies 0

 

 

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