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Study

Study Name: Coral microbial communities from various locations to study host-microbial communication

Projects

Biosamples

Organisms

Biosamples: 62 Seq. Projects: 62
STUDY INFORMATION
GOLD Study ID Gs0117432
Study Name Coral microbial communities from various locations to study host-microbial communication
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject Accession
SRA Studies
SRA Study Id SRP123713  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Diploria C B metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123715  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Diporia T B metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP142731  (Link to NCBI )
Study Title Metatranscriptome of coral microbial communities from Popa Island, Bocas del Toro, Panama - APAL C1
Study Abstract
  
SRA Study Id SRP123716  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Diporia T A metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123717  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Diploria C C metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123718  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Siderastrea C A metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123719  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Diporia T C metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP142738  (Link to NCBI )
Study Title Metatranscriptome of coral microbial communities from Popa Island, Bocas del Toro, Panama - APAL C3
Study Abstract
  
SRA Study Id SRP142739  (Link to NCBI )
Study Title Metatranscriptome of coral microbial communities from Popa Island, Bocas del Toro, Panama - APAL T2
Study Abstract
  
SRA Study Id SRP123710  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Orbicella T R C metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123711  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Diploria C A metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP142735  (Link to NCBI )
Study Title Metatranscriptome of coral microbial communities from Popa Island, Bocas del Toro, Panama - APAL C2
Study Abstract
  
SRA Study Id SRP123712  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Orbicella T R B metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP098457  (Link to NCBI )
Study Title Coral microbial communities from Florida Keys, Florida, USA - Orbicella T D metagenome metagenome
Study Abstract
  
SRA Study Id SRP098458  (Link to NCBI )
Study Title Coral microbial communities from Lord Howe Island, Old Settlement Bay, Australia - Cyphastrea 1 metagenome metagenome
Study Abstract
  
SRA Study Id SRP098459  (Link to NCBI )
Study Title Coral microbial communities from Petempiche,Puerto Morelos, Mexico - Orbicella C C metagenome metagenome
Study Abstract
  
SRA Study Id SRP176672  (Link to NCBI )
Study Title Metatranscriptome of coral microbial communities from Popa Island, Bocas del Toro, Panama - Acropora C pooled
Study Abstract
  
SRA Study Id SRP123724  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Siderastrea T A metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123703  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Orbicella 8 T B metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123725  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Siderastrea C C metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP142741  (Link to NCBI )
Study Title Metatranscriptome of coral microbial communities from Popa Island, Bocas del Toro, Panama - APAL T3
Study Abstract
  
SRA Study Id SRP123726  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Siderastrea T B metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123704  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Orbicella C A metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123705  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Orbicella 8 T C metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123727  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Siderastrea T C metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP142742  (Link to NCBI )
Study Title Metatranscriptome of coral microbial communities from Popa Island, Bocas del Toro, Panama - APAL T1
Study Abstract
  
SRA Study Id SRP123706  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Orbicella C B metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123707  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Orbicella C C metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123709  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Orbicella T R A metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123687  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Orbicella 8 C A metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123688  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Orbicella 8 C B metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123689  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Orbicella 8 C C metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123722  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Siderastrea C B metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP123701  (Link to NCBI )
Study Title Coral microbial communities from various places in Mexico - Orbicella 8 T A metatranscriptome metatranscriptome
Study Abstract
  
SRA Study Id SRP098427  (Link to NCBI )
Study Title Coral microbial communities from El Islote,Puerto Morelos, Mexico - Siderastrea C C metagenome metagenome
Study Abstract
  
SRA Study Id SRP098460  (Link to NCBI )
Study Title Coral microbial communities from La Bocana,Puerto Morelos, Mexico - Diploria C A metagenome metagenome
Study Abstract
  
SRA Study Id SRP098461  (Link to NCBI )
Study Title Coral microbial communities from Petempiche,Puerto Morelos, Mexico - Orbicella T R C metagenome metagenome
Study Abstract
  
SRA Study Id SRP098465  (Link to NCBI )
Study Title Coral microbial communities from Lord Howe Island, Old Settlement Bay, Australia - Cyphastrea 2 metagenome metagenome
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2015-10-28
Last Modified By JGI automated process on 2019-09-06
PI Medina Medina
Description The goal of this study is to simultaneously examine the interaction of all coral holobiont members--prokaryotes, archaea, eukaryotes and viruses--at the transcriptome level.
Relevance
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem Host-associated
Ecosystem Category Invertebrates
Ecosystem Type Cnidaria
Ecosystem Subtype Coral
Specific Ecosystem Unclassified
STUDY COMPOSITION
Number of Biosamples 62
Number of Organisms 0
Number of Seq Projects 62
Number of Analysis Projects 67
Number of Related Studies 0

 

 

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