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Study

Study Name: Deep subsurface shale carbon reservoir microbial communities from Ohio and West Virginia, USA

Projects

Biosamples

Organisms

Biosamples: 25 Seq. Projects: 65
STUDY INFORMATION
GOLD Study ID Gs0114675
Study Name Deep subsurface shale carbon reservoir microbial communities from Ohio and West Virginia, USA
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id SRP086843  (Link to NCBI )
Study Title Candidatus Frackibacter WG13 Genome sequencing
Study Abstract
  
SRA Study Id SRP086844  (Link to NCBI )
Study Title Geotoga petraea WG14 genome sequencing
Study Abstract
  
SRA Study Id SRP086841  (Link to NCBI )
Study Title Idiomarina zobellii KMM 231 genome sequencing
Study Abstract
  
SRA Study Id SRP086842  (Link to NCBI )
Study Title Candidatus Frackibacter WG11 Genome sequencing
Study Abstract
  
SRA Study Id SRP086848  (Link to NCBI )
Study Title Halomonas aquamarina 558 genome sequencing
Study Abstract
  
SRA Study Id SRP086845  (Link to NCBI )
Study Title Idiomarina abyssalis KMM 227 genome sequencing
Study Abstract
  
SRA Study Id SRP086846  (Link to NCBI )
Study Title Halomonas taenensis BH539 genome sequencing
Study Abstract
  
SRA Study Id SRP086840  (Link to NCBI )
Study Title Candidatus Frackibacter WG12 Genome sequencing
Study Abstract
  
SRA Study Id SRP109329  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_10
Study Abstract
  
SRA Study Id SRP086838  (Link to NCBI )
Study Title Halanaerobium congolense WG6 genome sequencing
Study Abstract
  
SRA Study Id SRP086839  (Link to NCBI )
Study Title Proteiniclasticum ruminis ML2 genome sequencing
Study Abstract
  
SRA Study Id SRP086854  (Link to NCBI )
Study Title Eubacterium barkeri VPI 5359 genome sequencing
Study Abstract
  
SRA Study Id SRP086855  (Link to NCBI )
Study Title Methanohalophilus halophilus Z-7982 genome sequencing
Study Abstract
  
SRA Study Id SRP086852  (Link to NCBI )
Study Title Eubacterium callanderi FD genome sequencing
Study Abstract
  
SRA Study Id SRP086853  (Link to NCBI )
Study Title Eubacterium aggregans SR12 genome sequencing
Study Abstract
  
SRA Study Id SRP086858  (Link to NCBI )
Study Title Methanococcoides vulcani SLH 33 genome sequencing
Study Abstract
  
SRA Study Id SRP086859  (Link to NCBI )
Study Title Methanolobus vulcani PL 12/M genome sequencing
Study Abstract
  
SRA Study Id SRP086856  (Link to NCBI )
Study Title Methanolobus profundi Mob M genome sequencing
Study Abstract
  
SRA Study Id SRP086857  (Link to NCBI )
Study Title Eubacterium limosum 32_A2 genome sequencing
Study Abstract
  
SRA Study Id SRP086851  (Link to NCBI )
Study Title Halarsenatibacter silvermanii SLAS-1 genome sequencing
Study Abstract
  
SRA Study Id SRP109537  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2015_5_14
Study Abstract
  
SRA Study Id SRP109535  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2015_1_7
Study Abstract
  
SRA Study Id SRP109337  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_20
Study Abstract
  
SRA Study Id SRP109336  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_18
Study Abstract
  
SRA Study Id SRP109335  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_16
Study Abstract
  
SRA Study Id SRP109333  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_11
Study Abstract
  
SRA Study Id SRP086865  (Link to NCBI )
Study Title Haloferax larsenii CDM_5 genome sequencing
Study Abstract
  
SRA Study Id SRP086821  (Link to NCBI )
Study Title Halanaerobium congolense WG8 genome sequencing
Study Abstract
  
SRA Study Id SRP086822  (Link to NCBI )
Study Title Halanaerobium congolense WG10 genome sequencing
Study Abstract
  
SRA Study Id SRP086863  (Link to NCBI )
Study Title Haloterrigena hispanica CDM_1 genome sequencing
Study Abstract
  
SRA Study Id SRP086864  (Link to NCBI )
Study Title Arthrobacter subterraneus NP_1H genome sequencing
Study Abstract
  
SRA Study Id SRP086825  (Link to NCBI )
Study Title Halanaerobium congolense WG5 genome sequencing
Study Abstract
  
SRA Study Id SRP086823  (Link to NCBI )
Study Title Halanaerobium congolense WG9 genome sequencing
Study Abstract
  
SRA Study Id SRP086861  (Link to NCBI )
Study Title Haloterrigena hispanica CDM_6 genome sequencing
Study Abstract
  
SRA Study Id SRP086862  (Link to NCBI )
Study Title Halanaerobium congolense UTICA-W4B3 Genome sequencing
Study Abstract
  
SRA Study Id SRP086860  (Link to NCBI )
Study Title Halanaerobium congolense UTICA-W4B2 Genome sequencing
Study Abstract
  
SRA Study Id SRP098534  (Link to NCBI )
Study Title Halanaerobium congolense UTICA-S4D12 Genome sequencing
Study Abstract
  
SRA Study Id SRP109546  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16
Study Abstract
  
SRA Study Id SRP098536  (Link to NCBI )
Study Title Marinobacter persicus UTICA-S1B3 Genome sequencing
Study Abstract
  
SRA Study Id SRP109544  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11
Study Abstract
  
SRA Study Id SRP109543  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11
Study Abstract
  
SRA Study Id SRP109542  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series LW 2014_7_11
Study Abstract
  
SRA Study Id SRP098530  (Link to NCBI )
Study Title Orenia metallireducens MSL47 genome sequencing
Study Abstract
  
SRA Study Id SRP098532  (Link to NCBI )
Study Title Marinobacter persicus UTICA-S1B6 Genome sequencing
Study Abstract
  
SRA Study Id SRP086831  (Link to NCBI )
Study Title Halanaerobium congolense WG2 genome sequencing
Study Abstract
  
SRA Study Id SRP086837  (Link to NCBI )
Study Title Halanaerobium congolense WG7 genome sequencing
Study Abstract
  
SRA Study Id SRP104746  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanotroph_Enrichment_5 metagenome
Study Abstract
  
SRA Study Id SRP104745  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_12
Study Abstract
  
SRA Study Id SRP104747  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - LMS_cellobiose_enrichment metagenome
Study Abstract
  
SRA Study Id SRP104744  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2015_2_5
Study Abstract
  
SRA Study Id SRP104743  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Halanaerobium induction metagenome
Study Abstract
  
SRA Study Id SRP109557  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC metagenome
Study Abstract
  
SRA Study Id SRP109357  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_22
Study Abstract
  
SRA Study Id SRP109356  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_11_5
Study Abstract
  
SRA Study Id SRP098528  (Link to NCBI )
Study Title Marinilabilia salmonicolor MSL42 genome sequencing
Study Abstract
  
SRA Study Id SRP109355  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_12_3
Study Abstract
  
SRA Study Id SRP098529  (Link to NCBI )
Study Title Orenia metallireducens MSL40 genome sequencing
Study Abstract
  
SRA Study Id SRP109354  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_12_17
Study Abstract
  
SRA Study Id SRP109353  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_1_29
Study Abstract
  
SRA Study Id SRP109352  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_11_19
Study Abstract
  
SRA Study Id SRP086829  (Link to NCBI )
Study Title Halanaerobium congolense WG1 genome sequencing
Study Abstract
  
SRA Study Id SRP098520  (Link to NCBI )
Study Title Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - WG8 viral induction metagenome
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2015-05-15
Last Modified By JGI automated process on 2019-09-06
PI Kelly Wrighton
Description Despite the importance of carbon-rich deep shale systems, little is known about microbe-catalyzed processes that may occur naturally within these formations, and how these change as a result of engineered activities. This has important implications on biodiversity change within the deep terrestrial biosphere, the efficiency of energy recovery, and the sustainability of our energy infrastructure. Although limited studies have identified diverse active microorganisms in deep shale formations, more research is needed to understand microbial mechanisms for growth and survival, and how such activities impact carbon and other biogeochemical cycles.
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA No
Is HMP No
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Terrestrial
Ecosystem Type Deep subsurface
Ecosystem Subtype Unclassified
Specific Ecosystem Unclassified
STUDY COMPOSITION
Number of Biosamples 25
Number of Organisms 40
Number of Seq Projects 65
Number of Analysis Projects 90
Number of Related Studies 0

 

 

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