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Study

Study Name: Estuarine microbial communities from the Columbia River estuary, to analyze effect of nutrient fluxes, a time series

Projects

Biosamples

Organisms

Biosamples: 186 Seq. Projects: 186
STUDY INFORMATION
GOLD Study ID Gs0114516
Study Name Estuarine microbial communities from the Columbia River estuary, to analyze effect of nutrient fluxes, a time series
Other Names A systems approach to evaluate physical constraints and microbial controls on fluxes of nutrients and energy in a coastal ecosystem
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject Accession
SRA Studies
SRA Study Id SRP144213  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.665
Study Abstract
  
SRA Study Id SRP144216  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.669
Study Abstract
  
SRA Study Id SRP144215  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.667
Study Abstract
  
SRA Study Id SRP104838  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753 metagenome
Study Abstract
  
SRA Study Id SRP104837  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.571 metagenome
Study Abstract
  
SRA Study Id SRP104839  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733 metagenome
Study Abstract
  
SRA Study Id SRP104833  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 metagenome
Study Abstract
  
SRA Study Id SRP104836  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709 metagenome
Study Abstract
  
SRA Study Id SRP104835  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.689 metagenome
Study Abstract
  
SRA Study Id SRP104830  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555 metagenome
Study Abstract
  
SRA Study Id SRP104832  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 metagenome
Study Abstract
  
SRA Study Id SRP104831  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545 metagenome
Study Abstract
  
SRA Study Id SRP144173  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.485
Study Abstract
  
SRA Study Id SRP144170  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.487
Study Abstract
  
SRA Study Id SRP144225  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.763
Study Abstract
  
SRA Study Id SRP144103  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R1035
Study Abstract
  
SRA Study Id SRP144224  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States – S.677
Study Abstract
  
SRA Study Id SRP144227  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.761
Study Abstract
  
SRA Study Id SRP144226  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.671
Study Abstract
  
SRA Study Id SRP104849  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 metagenome
Study Abstract
  
SRA Study Id SRP104848  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747 metagenome
Study Abstract
  
SRA Study Id SRP144101  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R1034
Study Abstract
  
SRA Study Id SRP104845  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 metagenome
Study Abstract
  
SRA Study Id SRP104844  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG S.737 metagenome
Study Abstract
  
SRA Study Id SRP104847  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG S.751 metagenome
Study Abstract
  
SRA Study Id SRP104846  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703 metagenome
Study Abstract
  
SRA Study Id SRP104841  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715 metagenome
Study Abstract
  
SRA Study Id SRP144108  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R1037
Study Abstract
  
SRA Study Id SRP104840  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743 metagenome
Study Abstract
  
SRA Study Id SRP104842  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579 metagenome
Study Abstract
  
SRA Study Id SRP144109  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R1070
Study Abstract
  
SRA Study Id SRP098105  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02 metagenome
Study Abstract
  
SRA Study Id SRP098106  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1552A-3 metagenome
Study Abstract
  
SRA Study Id SRP144184  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.489
Study Abstract
  
SRA Study Id SRP144183  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States – S.493
Study Abstract
  
SRA Study Id SRP144186  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.491
Study Abstract
  
SRA Study Id SRP144185  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States – S.499
Study Abstract
  
SRA Study Id SRP144182  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States – S.587
Study Abstract
  
SRA Study Id SRP144159  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.458
Study Abstract
  
SRA Study Id SRP144158  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.456
Study Abstract
  
SRA Study Id SRP104859  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3 metagenome
Study Abstract
  
SRA Study Id SRP144157  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.460
Study Abstract
  
SRA Study Id SRP164840  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.376
Study Abstract
  
SRA Study Id SRP104855  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02 metagenome
Study Abstract
  
SRA Study Id SRP164842  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.641
Study Abstract
  
SRA Study Id SRP104858  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3 metagenome
Study Abstract
  
SRA Study Id SRP104857  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3 metagenome
Study Abstract
  
SRA Study Id SRP104852  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02 metagenome
Study Abstract
  
SRA Study Id SRP104851  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02 metagenome
Study Abstract
  
SRA Study Id SRP104854  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3 metagenome
Study Abstract
  
SRA Study Id SRP104853  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3 metagenome
Study Abstract
  
SRA Study Id SRP164839  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Washington, United States – R1276
Study Abstract
  
SRA Study Id SRP104850  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1370A-3 metagenome
Study Abstract
  
SRA Study Id SRP144151  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.437
Study Abstract
  
SRA Study Id SRP144150  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States – S.445
Study Abstract
  
SRA Study Id SRP104908  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3 metagenome
Study Abstract
  
SRA Study Id SRP139098  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - R8.48AS metaT metatranscriptome
Study Abstract
  
SRA Study Id SRP104907  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02 metagenome
Study Abstract
  
SRA Study Id SRP144205  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.595
Study Abstract
  
SRA Study Id SRP104909  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02 metagenome
Study Abstract
  
SRA Study Id SRP104903  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1556B-3 metagenome
Study Abstract
  
SRA Study Id SRP104906  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1562A-3 metagenome
Study Abstract
  
SRA Study Id SRP104905  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3 metagenome
Study Abstract
  
SRA Study Id SRP104867  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3 metagenome
Study Abstract
  
SRA Study Id SRP104900  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3 metagenome
Study Abstract
  
SRA Study Id SRP104866  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1546A-02 metagenome
Study Abstract
  
SRA Study Id SRP104902  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02 metagenome
Study Abstract
  
SRA Study Id SRP104869  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1547A-3 metagenome
Study Abstract
  
SRA Study Id SRP104901  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02 metagenome
Study Abstract
  
SRA Study Id SRP104868  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1546B-02 metagenome
Study Abstract
  
SRA Study Id SRP104863  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3 metagenome
Study Abstract
  
SRA Study Id SRP144207  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.593
Study Abstract
  
SRA Study Id SRP144206  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.633
Study Abstract
  
SRA Study Id SRP104865  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3 metagenome
Study Abstract
  
SRA Study Id SRP104864  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02 metagenome
Study Abstract
  
SRA Study Id SRP144208  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.637
Study Abstract
  
SRA Study Id SRP104861  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02 metagenome
Study Abstract
  
SRA Study Id SRP104860  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02 metagenome
Study Abstract
  
SRA Study Id SRP144161  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States – S.454
Study Abstract
  
SRA Study Id SRP144160  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.462
Study Abstract
  
SRA Study Id SRP144137  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.304
Study Abstract
  
SRA Study Id SRP144136  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.300
Study Abstract
  
SRA Study Id SRP144139  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.378
Study Abstract
  
SRA Study Id SRP144138  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.302
Study Abstract
  
SRA Study Id SRP144133  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States – S.272
Study Abstract
  
SRA Study Id SRP104915  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3 metagenome
Study Abstract
  
SRA Study Id SRP104914  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02 metagenome
Study Abstract
  
SRA Study Id SRP171753  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R1184
Study Abstract
  
SRA Study Id SRP104917  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1569-02 metagenome
Study Abstract
  
SRA Study Id SRP144134  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.298
Study Abstract
  
SRA Study Id SRP104916  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1569A-3 metagenome
Study Abstract
  
SRA Study Id SRP104878  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02 metagenome
Study Abstract
  
SRA Study Id SRP104911  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02 metagenome
Study Abstract
  
SRA Study Id SRP104910  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02 metagenome
Study Abstract
  
SRA Study Id SRP104877  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02 metagenome
Study Abstract
  
SRA Study Id SRP104913  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3 metagenome
Study Abstract
  
SRA Study Id SRP104912  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1568-02 metagenome
Study Abstract
  
SRA Study Id SRP104879  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3 metagenome
Study Abstract
  
SRA Study Id SRP104874  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3 metagenome
Study Abstract
  
SRA Study Id SRP104873  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02 metagenome
Study Abstract
  
SRA Study Id SRP160737  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States – S.625
Study Abstract
  
SRA Study Id SRP104875  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3 metagenome
Study Abstract
  
SRA Study Id SRP104870  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02 metagenome
Study Abstract
  
SRA Study Id SRP144090  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R9.63.3A
Study Abstract
  
SRA Study Id SRP104872  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3 metagenome
Study Abstract
  
SRA Study Id SRP104871  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02 metagenome
Study Abstract
  
SRA Study Id SRP160861  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.629
Study Abstract
  
SRA Study Id SRP139106  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - R.1175 metaT metatranscriptome
Study Abstract
  
SRA Study Id SRP144096  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R1033
Study Abstract
  
SRA Study Id SRP144131  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.266
Study Abstract
  
SRA Study Id SRP144097  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R881
Study Abstract
  
SRA Study Id SRP144130  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.268
Study Abstract
  
SRA Study Id SRP144092  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R877
Study Abstract
  
SRA Study Id SRP144091  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R878
Study Abstract
  
SRA Study Id SRP144093  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R876
Study Abstract
  
SRA Study Id SRP144148  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.433
Study Abstract
  
SRA Study Id SRP144149  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.425
Study Abstract
  
SRA Study Id SRP144143  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States – S.384
Study Abstract
  
SRA Study Id SRP144146  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.429
Study Abstract
  
SRA Study Id SRP144145  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States – S.386
Study Abstract
  
SRA Study Id SRP104889  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02 metagenome
Study Abstract
  
SRA Study Id SRP104888  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02 metagenome
Study Abstract
  
SRA Study Id SRP104885  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02 metagenome
Study Abstract
  
SRA Study Id SRP104887  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1551A-3 metagenome
Study Abstract
  
SRA Study Id SRP104886  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02 metagenome
Study Abstract
  
SRA Study Id SRP104881  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3 metagenome
Study Abstract
  
SRA Study Id SRP104880  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1550A-3 metagenome
Study Abstract
  
SRA Study Id SRP104883  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1550A-02 metagenome
Study Abstract
  
SRA Study Id SRP107597  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 metagenome
Study Abstract
  
SRA Study Id SRP107598  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 metagenome
Study Abstract
  
SRA Study Id SRP104882  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1550B-3 metagenome
Study Abstract
  
SRA Study Id SRP107595  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757 metagenome
Study Abstract
  
SRA Study Id SRP144140  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States – S.306
Study Abstract
  
SRA Study Id SRP144142  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.374
Study Abstract
  
SRA Study Id SRP144141  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.380
Study Abstract
  
SRA Study Id SRP144236  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.765
Study Abstract
  
SRA Study Id SRP144115  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Washington, United States – R1119
Study Abstract
  
SRA Study Id SRP144117  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R1161
Study Abstract
  
SRA Study Id SRP144116  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R1166
Study Abstract
  
SRA Study Id SRP144111  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Washington, United States – R1088
Study Abstract
  
SRA Study Id SRP144199  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.589
Study Abstract
  
SRA Study Id SRP144198  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.591
Study Abstract
  
SRA Study Id SRP144110  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R1072
Study Abstract
  
SRA Study Id SRP144113  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R1080
Study Abstract
  
SRA Study Id SRP144112  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R1073
Study Abstract
  
SRA Study Id SRP104899  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02 metagenome
Study Abstract
  
SRA Study Id SRP144119  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.24
Study Abstract
  
SRA Study Id SRP104896  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1555C-3 metagenome
Study Abstract
  
SRA Study Id SRP144239  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.767
Study Abstract
  
SRA Study Id SRP104895  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02 metagenome
Study Abstract
  
SRA Study Id SRP144118  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R1183
Study Abstract
  
SRA Study Id SRP104898  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02 metagenome
Study Abstract
  
SRA Study Id SRP104897  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02 metagenome
Study Abstract
  
SRA Study Id SRP104892  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1555A-3 metagenome
Study Abstract
  
SRA Study Id SRP104891  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02 metagenome
Study Abstract
  
SRA Study Id SRP104894  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3 metagenome
Study Abstract
  
SRA Study Id SRP104893  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1554B-3 metagenome
Study Abstract
  
SRA Study Id SRP104890  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - metaG 1553A-3 metagenome
Study Abstract
  
SRA Study Id SRP144073  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R8.46A
Study Abstract
  
SRA Study Id SRP144071  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R8.37A
Study Abstract
  
SRA Study Id SRP144125  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States – S.191
Study Abstract
  
SRA Study Id SRP144128  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.264
Study Abstract
  
SRA Study Id SRP144122  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.182
Study Abstract
  
SRA Study Id SRP144364  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.180
Study Abstract
  
SRA Study Id SRP104827  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725 metagenome
Study Abstract
  
SRA Study Id SRP104826  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573 metagenome
Study Abstract
  
SRA Study Id SRP144121  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.184
Study Abstract
  
SRA Study Id SRP144124  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States – S.189
Study Abstract
  
SRA Study Id SRP144123  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.186
Study Abstract
  
SRA Study Id SRP104828  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 metagenome
Study Abstract
  
SRA Study Id SRP104825  (Link to NCBI )
Study Title Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705 metagenome
Study Abstract
  
SRA Study Id SRP144129  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.270
Study Abstract
  
SRA Study Id SRP144120  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States – S.23
Study Abstract
  
SRA Study Id SRP144086  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R868
Study Abstract
  
SRA Study Id SRP144240  (Link to NCBI )
Study Title Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States – S771
Study Abstract
  
SRA Study Id SRP144083  (Link to NCBI )
Study Title Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States – R9.63AS
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By Jyothi Mallajosyula on 2015-04-02
Last Modified By JGI automated process on 2019-09-06
PI Holly Simon
Description Land-ocean margins are heavily populated areas subjected to powerful physical forces and vulnerable to the impacts of human activity and climate change. Estuaries are uniquely complex land-margin systems. They can enhance microbial production of the greenhouse gases N2O and CH4. This proposal hypothesizes that events resulting from physical forcing, such as Estuarine turbidity maxima (ETM) and upwelling/hypoxia, and periodic biological events such as phytoplankton blooms, impact the diversity and function of estuarine bacteria and archaea in the water column and fundamentally change the flow of nutrients and energy through the system. Comparative metagenomics and metatranscriptomics will be used in this study to assess the taxonomic and metabolic properties of estuarine microbial communities during conditions of high and low-nutrient and energy fluxes. It will also test whether a unique estuarine microbial community develops on particles trapped by ETM, and identify key microorganisms involved in regulating nutrient and energy flows in the estuary, and their aeffect on the end members of the estuary, the river and the ocean.
Relevance Environmental
Ecological
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA No
Is HMP No
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Marine
Ecosystem Subtype Unclassified
Specific Ecosystem Unclassified
Ecosystem Path ID 4003
STUDY COMPOSITION
Number of Biosamples 186
Number of Organisms 0
Number of Seq Projects 186
Number of Analysis Projects 547
Number of Related Studies 0

 

 

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