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Study

Study Name: Comparative genomics of bacterial root endophytes of switchgrass collected from native prairies over two seasons

Projects

Biosamples

Organisms

Biosamples: 0 Seq. Projects: 150
STUDY INFORMATION
GOLD Study ID Gs0111390
Study Name Comparative genomics of bacterial root endophytes of switchgrass collected from native prairies over two seasons
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id SRP085159  (Link to NCBI )
Study Title Pseudomonas sp. NFIX28
Study Abstract
  
SRA Study Id SRP085038  (Link to NCBI )
Study Title Rhizobium sp. NFACC06-2
Study Abstract
  
SRA Study Id SRP085158  (Link to NCBI )
Study Title Klebsiella sp. NFIX27
Study Abstract
  
SRA Study Id SRP085037  (Link to NCBI )
Study Title Pseudomonas sp. NFACC02
Study Abstract
  
SRA Study Id SRP085039  (Link to NCBI )
Study Title Pseudomonas sp. NFACC05-1
Study Abstract
  
SRA Study Id SRP085151  (Link to NCBI )
Study Title Klebsiella sp. NFIX23
Study Abstract
  
SRA Study Id SRP085153  (Link to NCBI )
Study Title Klebsiella sp. NFIX25
Study Abstract
  
SRA Study Id SRP085152  (Link to NCBI )
Study Title Klebsiella sp. NFIX24
Study Abstract
  
SRA Study Id SRP152083  (Link to NCBI )
Study Title Bacillus sp. NFR08
Study Abstract
  
SRA Study Id SRP085155  (Link to NCBI )
Study Title Enterobacter sp. NFIX03
Study Abstract
  
SRA Study Id SRP085154  (Link to NCBI )
Study Title Paenibacillus sp. NFR01
Study Abstract
  
SRA Study Id SRP152084  (Link to NCBI )
Study Title Microbacterium sp. NFIX05
Study Abstract
  
SRA Study Id SRP085036  (Link to NCBI )
Study Title Ralstonia sp. NFACC01
Study Abstract
  
SRA Study Id SRP085157  (Link to NCBI )
Study Title Klebsiella sp. NFIX26
Study Abstract
  
SRA Study Id SRP085156  (Link to NCBI )
Study Title Pseudomonas sp. NFPP11
Study Abstract
  
SRA Study Id SRP096455  (Link to NCBI )
Study Title Rhizobium tropici strain:NFR14 Genome sequencing and assembly
Study Abstract
  
SRA Study Id SRP096457  (Link to NCBI )
Study Title Klebsiella sp. NFIX53 Genome sequencing
Study Abstract
  
SRA Study Id SRP096453  (Link to NCBI )
Study Title Pseudomonas sp. NFACC11-2
Study Abstract
  
SRA Study Id SRP085049  (Link to NCBI )
Study Title Pseudomonas sp. NFACC17-2
Study Abstract
  
SRA Study Id SRP085048  (Link to NCBI )
Study Title Pseudomonas sp. NFACC10-1
Study Abstract
  
SRA Study Id SRP085169  (Link to NCBI )
Study Title Klebsiella sp. NFIX40
Study Abstract
  
SRA Study Id SRP085162  (Link to NCBI )
Study Title Klebsiella sp. NFIX30
Study Abstract
  
SRA Study Id SRP085041  (Link to NCBI )
Study Title Pseudomonas sp. NFACC06-1
Study Abstract
  
SRA Study Id SRP085161  (Link to NCBI )
Study Title Klebsiella sp. NFIX34
Study Abstract
  
SRA Study Id SRP085040  (Link to NCBI )
Study Title Sinorhizobium sp. NFACC03
Study Abstract
  
SRA Study Id SRP085043  (Link to NCBI )
Study Title Pseudomonas sp. NFACC04-2
Study Abstract
  
SRA Study Id SRP085164  (Link to NCBI )
Study Title Klebsiella sp. NFIX33
Study Abstract
  
SRA Study Id SRP085163  (Link to NCBI )
Study Title Klebsiella sp. NFIX36
Study Abstract
  
SRA Study Id SRP085166  (Link to NCBI )
Study Title Klebsiella sp. NFIX37
Study Abstract
  
SRA Study Id SRP085045  (Link to NCBI )
Study Title Pseudomonas sp. NFACC08-1
Study Abstract
  
SRA Study Id SRP085044  (Link to NCBI )
Study Title Pseudomonas sp. NFACC09-4
Study Abstract
  
SRA Study Id SRP085165  (Link to NCBI )
Study Title Klebsiella sp. NFIX35
Study Abstract
  
SRA Study Id SRP085168  (Link to NCBI )
Study Title Enterobacter aerogenes NFIX39
Study Abstract
  
SRA Study Id SRP085047  (Link to NCBI )
Study Title Pseudomonas sp. NFACC25
Study Abstract
  
SRA Study Id SRP085046  (Link to NCBI )
Study Title Pseudomonas sp. NFACC13-1
Study Abstract
  
SRA Study Id SRP085167  (Link to NCBI )
Study Title Klebsiella sp. NFIX38
Study Abstract
  
SRA Study Id SRP085160  (Link to NCBI )
Study Title Klebsiella sp. NFIX29
Study Abstract
  
SRA Study Id SRP085137  (Link to NCBI )
Study Title Janthinobacterium lividum NFR18
Study Abstract
  
SRA Study Id SRP085136  (Link to NCBI )
Study Title Pseudomonas sp. NFPP09
Study Abstract
  
SRA Study Id SRP085096  (Link to NCBI )
Study Title Mesorhizobium sp. NFR06
Study Abstract
  
SRA Study Id SRP085095  (Link to NCBI )
Study Title Pseudomonas sp. NFR16
Study Abstract
  
SRA Study Id SRP085098  (Link to NCBI )
Study Title Sphingomonas sp. NFR04
Study Abstract
  
SRA Study Id SRP085131  (Link to NCBI )
Study Title Klebsiella sp. NFIX11
Study Abstract
  
SRA Study Id SRP085130  (Link to NCBI )
Study Title Klebsiella sp. NFPP35
Study Abstract
  
SRA Study Id SRP085097  (Link to NCBI )
Study Title Pseudomonas sp. NFR09
Study Abstract
  
SRA Study Id SRP085133  (Link to NCBI )
Study Title Klebsiella sp. NFIX21
Study Abstract
  
SRA Study Id SRP085132  (Link to NCBI )
Study Title Klebsiella sp. NFIX12
Study Abstract
  
SRA Study Id SRP085099  (Link to NCBI )
Study Title Pseudomonas sp. NFPP12
Study Abstract
  
SRA Study Id SRP085135  (Link to NCBI )
Study Title Klebsiella sp. NFIX20
Study Abstract
  
SRA Study Id SRP085134  (Link to NCBI )
Study Title Klebsiella sp. NFIX22
Study Abstract
  
SRA Study Id SRP096433  (Link to NCBI )
Study Title Cedecea sp. NFIX57
Study Abstract
  
SRA Study Id SRP096434  (Link to NCBI )
Study Title Rahnella sp. NFIX50
Study Abstract
  
SRA Study Id SRP096435  (Link to NCBI )
Study Title Pseudomonas sp. NFIX51
Study Abstract
  
SRA Study Id SRP085090  (Link to NCBI )
Study Title Pantoea ananatis NFR11
Study Abstract
  
SRA Study Id SRP096436  (Link to NCBI )
Study Title Klebsiella pneumoniae strain:NFIX52 Genome sequencing
Study Abstract
  
SRA Study Id SRP085092  (Link to NCBI )
Study Title Pseudomonas sp. NFPP07
Study Abstract
  
SRA Study Id SRP085091  (Link to NCBI )
Study Title Pseudomonas sp. NFPP02
Study Abstract
  
SRA Study Id SRP085094  (Link to NCBI )
Study Title Pseudomonas sp. NFPP08
Study Abstract
  
SRA Study Id SRP085093  (Link to NCBI )
Study Title Pseudomonas sp. NFR02
Study Abstract
  
SRA Study Id SRP085142  (Link to NCBI )
Study Title Rhizobium sp. NFR07
Study Abstract
  
SRA Study Id SRP085144  (Link to NCBI )
Study Title Mucilaginibacter sp. NFR10
Study Abstract
  
SRA Study Id SRP085143  (Link to NCBI )
Study Title Pseudomonas sp. NFACC16-2
Study Abstract
  
SRA Study Id SRP085146  (Link to NCBI )
Study Title Rhizobium sp. NFR03
Study Abstract
  
SRA Study Id SRP096427  (Link to NCBI )
Study Title Pseudomonas sp. NFACC50-1
Study Abstract
  
SRA Study Id SRP096428  (Link to NCBI )
Study Title Pseudomonas sp. NFPP22
Study Abstract
  
SRA Study Id SRP096429  (Link to NCBI )
Study Title Rhizobium sp. NFR17
Study Abstract
  
SRA Study Id SRP085115  (Link to NCBI )
Study Title Enterobacter sp. NFIX09
Study Abstract
  
SRA Study Id SRP085114  (Link to NCBI )
Study Title Enterobacter sp. NFIX06
Study Abstract
  
SRA Study Id SRP085117  (Link to NCBI )
Study Title Klebsiella sp. NFIX14
Study Abstract
  
SRA Study Id SRP085116  (Link to NCBI )
Study Title Staphylococcus sp. NFPP34
Study Abstract
  
SRA Study Id SRP085119  (Link to NCBI )
Study Title Staphylococcus pasteuri NFIX07
Study Abstract
  
SRA Study Id SRP085118  (Link to NCBI )
Study Title Pseudomonas sp. NFIX10
Study Abstract
  
SRA Study Id SRP085074  (Link to NCBI )
Study Title Pseudomonas sp. NFACC42-2
Study Abstract
  
SRA Study Id SRP085073  (Link to NCBI )
Study Title Pseudomonas sp. NFACC48-1
Study Abstract
  
SRA Study Id SRP085197  (Link to NCBI )
Study Title Klebsiella sp. NFIX43
Study Abstract
  
SRA Study Id SRP085076  (Link to NCBI )
Study Title Pseudomonas sp. NFACC44-2
Study Abstract
  
SRA Study Id SRP085196  (Link to NCBI )
Study Title Enterobacter sp. NFIX45
Study Abstract
  
SRA Study Id SRP085075  (Link to NCBI )
Study Title Pseudomonas sp. NFACC43
Study Abstract
  
SRA Study Id SRP085078  (Link to NCBI )
Study Title Pseudomonas sp. NFACC51
Study Abstract
  
SRA Study Id SRP085111  (Link to NCBI )
Study Title Pseudomonas sp. NFPP33
Study Abstract
  
SRA Study Id SRP085110  (Link to NCBI )
Study Title Burkholderia sp. NFPP32
Study Abstract
  
SRA Study Id SRP085077  (Link to NCBI )
Study Title Pseudomonas sp. NFACC47-1
Study Abstract
  
SRA Study Id SRP085113  (Link to NCBI )
Study Title Pseudomonas aeruginosa NFHH01
Study Abstract
  
SRA Study Id SRP085079  (Link to NCBI )
Study Title Pseudomonas sp. NFACC52
Study Abstract
  
SRA Study Id SRP085070  (Link to NCBI )
Study Title Pseudomonas sp. NFACC46-3
Study Abstract
  
SRA Study Id SRP085072  (Link to NCBI )
Study Title Pseudomonas sp. NFACC49-2
Study Abstract
  
SRA Study Id SRP085071  (Link to NCBI )
Study Title Pseudomonas sp. NFACC45
Study Abstract
  
SRA Study Id SRP097460  (Link to NCBI )
Study Title Enterobacter asburiae strain:NFIX55 Genome sequencing
Study Abstract
  
SRA Study Id SRP097463  (Link to NCBI )
Study Title Pantoea ananatis NFIX48
Study Abstract
  
SRA Study Id SRP085126  (Link to NCBI )
Study Title Enterobacter sp. NFIX04
Study Abstract
  
SRA Study Id SRP085125  (Link to NCBI )
Study Title Klebsiella sp. NFIX17
Study Abstract
  
SRA Study Id SRP085128  (Link to NCBI )
Study Title Klebsiella sp. NFIX19
Study Abstract
  
SRA Study Id SRP085127  (Link to NCBI )
Study Title Rhizobium sp. NFIX02
Study Abstract
  
SRA Study Id SRP085129  (Link to NCBI )
Study Title Klebsiella sp. NFIX13
Study Abstract
  
SRA Study Id SRP085085  (Link to NCBI )
Study Title Pseudomonas sp. NFPP14
Study Abstract
  
SRA Study Id SRP085084  (Link to NCBI )
Study Title Pseudomonas sp. NFPP17
Study Abstract
  
SRA Study Id SRP085087  (Link to NCBI )
Study Title Bradyrhizobium sp. NFR13
Study Abstract
  
SRA Study Id SRP085120  (Link to NCBI )
Study Title Klebsiella sp. NFIX18
Study Abstract
  
SRA Study Id SRP085086  (Link to NCBI )
Study Title Pseudomonas sp. NFPP16
Study Abstract
  
SRA Study Id SRP085122  (Link to NCBI )
Study Title Klebsiella sp. NFIX15
Study Abstract
  
SRA Study Id SRP085089  (Link to NCBI )
Study Title Pseudomonas sp. NFPP04
Study Abstract
  
SRA Study Id SRP085088  (Link to NCBI )
Study Title Rhizobium sp. NFR12
Study Abstract
  
SRA Study Id SRP085121  (Link to NCBI )
Study Title Klebsiella sp. NFIX16
Study Abstract
  
SRA Study Id SRP085124  (Link to NCBI )
Study Title Rhizobium sp. NFIX01
Study Abstract
  
SRA Study Id SRP085123  (Link to NCBI )
Study Title Enterobacter sp. NFIX08
Study Abstract
  
SRA Study Id SRP097458  (Link to NCBI )
Study Title Enterobacter ludwigii strain:NFPP41 Genome sequencing and assembly
Study Abstract
  
SRA Study Id SRP085081  (Link to NCBI )
Study Title Pseudomonas sp. NFACC56-3
Study Abstract
  
SRA Study Id SRP085080  (Link to NCBI )
Study Title Pseudomonas sp. NFACC54
Study Abstract
  
SRA Study Id SRP085083  (Link to NCBI )
Study Title Pseudomonas sp. NFPP15
Study Abstract
  
SRA Study Id SRP085082  (Link to NCBI )
Study Title Pseudomonas sp. NFPP13
Study Abstract
  
SRA Study Id SRP085059  (Link to NCBI )
Study Title Variovorax sp. NFACC27
Study Abstract
  
SRA Study Id SRP085052  (Link to NCBI )
Study Title Pseudomonas sp. NFACC07-1
Study Abstract
  
SRA Study Id SRP085051  (Link to NCBI )
Study Title Pseudomonas sp. NFACC19-2
Study Abstract
  
SRA Study Id SRP085054  (Link to NCBI )
Study Title Pseudomonas sp. NFACC24-1
Study Abstract
  
SRA Study Id SRP085053  (Link to NCBI )
Study Title Pseudomonas sp. NFACC14
Study Abstract
  
SRA Study Id SRP085177  (Link to NCBI )
Study Title Klebsiella sp. NFIX54
Study Abstract
  
SRA Study Id SRP085056  (Link to NCBI )
Study Title Pseudomonas sp. NFACC23-1
Study Abstract
  
SRA Study Id SRP085055  (Link to NCBI )
Study Title Achromobacter sp. NFACC18-2
Study Abstract
  
SRA Study Id SRP085179  (Link to NCBI )
Study Title Klebsiella sp. NFIX56
Study Abstract
  
SRA Study Id SRP085058  (Link to NCBI )
Study Title Variovorax sp. NFACC28
Study Abstract
  
SRA Study Id SRP085178  (Link to NCBI )
Study Title Enterobacter sp. NFIX58
Study Abstract
  
SRA Study Id SRP085057  (Link to NCBI )
Study Title Pseudomonas sp. NFACC15-1
Study Abstract
  
SRA Study Id SRP085171  (Link to NCBI )
Study Title Klebsiella sp. NFIX41
Study Abstract
  
SRA Study Id SRP085050  (Link to NCBI )
Study Title Variovorax sp. NFACC26
Study Abstract
  
SRA Study Id SRP085170  (Link to NCBI )
Study Title Klebsiella sp. NFIX42
Study Abstract
  
SRA Study Id SRP085104  (Link to NCBI )
Study Title Pseudomonas sp. NFPP19
Study Abstract
  
SRA Study Id SRP085103  (Link to NCBI )
Study Title Enterobacter sp. NFR05
Study Abstract
  
SRA Study Id SRP085106  (Link to NCBI )
Study Title Pseudomonas sp. NFPP24
Study Abstract
  
SRA Study Id SRP085105  (Link to NCBI )
Study Title Pseudomonas sp. NFPP18
Study Abstract
  
SRA Study Id SRP085108  (Link to NCBI )
Study Title Pseudomonas sp. NFPP28
Study Abstract
  
SRA Study Id SRP085107  (Link to NCBI )
Study Title Pseudomonas sp. NFPP25
Study Abstract
  
SRA Study Id SRP085109  (Link to NCBI )
Study Title Pantoea agglomerans NFPP29
Study Abstract
  
SRA Study Id SRP085184  (Link to NCBI )
Study Title Pseudomonas sp. NFIX46
Study Abstract
  
SRA Study Id SRP085183  (Link to NCBI )
Study Title Pseudomonas sp. NFIX49
Study Abstract
  
SRA Study Id SRP085062  (Link to NCBI )
Study Title Pseudomonas sp. NFACC32-1
Study Abstract
  
SRA Study Id SRP085065  (Link to NCBI )
Study Title Pseudomonas sp. NFACC36
Study Abstract
  
SRA Study Id SRP085186  (Link to NCBI )
Study Title Pseudomonas putida NFIX47
Study Abstract
  
SRA Study Id SRP085185  (Link to NCBI )
Study Title Klebsiella sp. NFIX44
Study Abstract
  
SRA Study Id SRP166416  (Link to NCBI )
Study Title Enterobacteriaceae bacterium NFIX31 Genome sequencing
Study Abstract
  
SRA Study Id SRP085067  (Link to NCBI )
Study Title Pseudomonas sp. NFACC39-1
Study Abstract
  
SRA Study Id SRP085100  (Link to NCBI )
Study Title Sphingomonas sp. NFR15
Study Abstract
  
SRA Study Id SRP085066  (Link to NCBI )
Study Title Pseudomonas sp. NFACC37-1
Study Abstract
  
SRA Study Id SRP085102  (Link to NCBI )
Study Title Pseudomonas sp. NFPP05
Study Abstract
  
SRA Study Id SRP085069  (Link to NCBI )
Study Title Pseudomonas sp. NFACC41-3
Study Abstract
  
SRA Study Id SRP085101  (Link to NCBI )
Study Title Pseudomonas sp. NFPP10
Study Abstract
  
SRA Study Id SRP085068  (Link to NCBI )
Study Title Burkholderia sp. NFACC38-1
Study Abstract
  
SRA Study Id SRP085061  (Link to NCBI )
Study Title Burkholderia sp. NFACC33-1
Study Abstract
  
SRA Study Id SRP085181  (Link to NCBI )
Study Title Enterobacter sp. NFIX59
Study Abstract
  
SRA Study Id SRP085060  (Link to NCBI )
Study Title Variovorax sp. NFACC29
Study Abstract
  
SRA Study Id SRP096463  (Link to NCBI )
Study Title Burkholderia pyrrocinia NFIX32
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2014-09-19
Last Modified By
PI Yuhong Tang
Description Comparative genomics of bacterial root endophytes of switchgrass collected from native prairies over two seasons
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study No
Publication
Is GEBA No
Is HMP No
ECOSYSTEM CLASSIFICATION
Ecosystem
Ecosystem Category
Ecosystem Type
Ecosystem Subtype
Specific Ecosystem
STUDY COMPOSITION
Number of Biosamples 0
Number of Organisms 150
Number of Seq Projects 150
Number of Analysis Projects 150
Number of Related Studies 0

 

 

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