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Study

Study Name: Fungal endosymbiont bacterial communities from various locations

Projects

Biosamples

Organisms

Biosamples: 62 Seq. Projects: 69
STUDY INFORMATION
GOLD Study ID Gs0110164
Study Name Fungal endosymbiont bacterial communities from various locations
Other Names Comparative genomics of early diverging terrestrial fungi and their bacterial endosymbionts
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id SRP114281  (Link to NCBI )
Study Title plant metagenome
Study Abstract
  
SRA Study Id SRP082941  (Link to NCBI )
Study Title Rhizopus microsporus ATCC11559 Minimal Draft genome sequencing
Study Abstract
  
SRA Study Id SRP231563  (Link to NCBI )
Study Title Plant-associated fungal endosymbiont bacterial communities from North Carolina, USA - Mortierella humilis PMI_1414 - Glomeribacter phylotype 2 Metagenome metagenome
Study Abstract
  
SRA Study Id SRP099908  (Link to NCBI )
Study Title Gigaspora margarita endosymbiont bacterial communities from the USA - BEG 34 Metagenome metagenome
Study Abstract
  
SRA Study Id SRP111834  (Link to NCBI )
Study Title Terrestrial fungal endosymbiont bacterial communities from North Carolina, USA - Mortierella minutissima CK281 Glomeribacter phylotype 2 Resequencing metagenome
Study Abstract
  
SRA Study Id SRP098327  (Link to NCBI )
Study Title Terrestrial fungal endosymbiont bacterial communities from Pennsylvania, USA - Mortierella humilis AD092 Mollicutes-related endobacteria (MRE) phylotype 1 Resequencing metagenome
Study Abstract
  
SRA Study Id SRP111825  (Link to NCBI )
Study Title Terrestrial fungal endosymbiont bacterial communities from Pennsylvania, USA - Mortierella humilis AD086 Glomeribacter phylotype 4 Resequencing metagenome
Study Abstract
  
SRA Study Id SRP111814  (Link to NCBI )
Study Title Plant-associated fungal endosymbiont bacterial communities from Illinois, USA - Mortierella gamsii 1 14PY_25W - Glomeribacter phylotype 2 Resequencing metagenome
Study Abstract
  
SRA Study Id SRP098328  (Link to NCBI )
Study Title Terrestrial fungal endosymbiont bacterial communities from New Zealand - Mortierella humilis AD003 Glomeribacter phylotype 2 Resequencing metagenome
Study Abstract
  
SRA Study Id SRP111835  (Link to NCBI )
Study Title Terrestrial fungal endosymbiont bacterial communities from North Carolina, USA - Mortierella minutissima REB-025A Glomeribacter phylotype 4 Resequencing metagenome
Study Abstract
  
SRA Study Id SRP111827  (Link to NCBI )
Study Title Plant-associated fungal endosymbiont bacterial communities from Michigan, USA - Mortierella elongata AD073 Glomeribacter phylotype 2 & Mollicutes-related endobacteria (MRE) phylotype 1 Resequencing metagenome
Study Abstract
  
SRA Study Id SRP111826  (Link to NCBI )
Study Title Terrestrial fungal endosymbiont bacterial communities from Michigan, USA - Mortierella elongata NVP80 Mollicutes-related endobacteria (MRE) phylotype 1 Resequencing metagenome
Study Abstract
  
SRA Study Id SRP111828  (Link to NCBI )
Study Title plant metagenome
Study Abstract
  
SRA Study Id SRP082946  (Link to NCBI )
Study Title Rhizopus microsporus ATCC52814 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP111830  (Link to NCBI )
Study Title Terrestrial fungal endosymbiont bacterial communities from Utah, USA - Mortierella elongata AD022 Glomeribacter phylotype 2 Resequencing metagenome
Study Abstract
  
SRA Study Id SRP111840  (Link to NCBI )
Study Title Plant-associated fungal endosymbiont bacterial communities from Michigan, USA - Mortierella minutissima AD065 - Glomeribacter phylotype 2 & Mollicutes-related endobacteria (MRE) phylotype 1 Resequencing metagenome
Study Abstract
  
Legacy ER Study ID 69545
Legacy GOLD ID Gm0069545
Added By Jyothi Mallajosyula on 2014-02-03
Last Modified By JGI automated process on 2019-09-06
PI Gregory Bonito
Description This study is focused on obtaining metagenomes of early diverging plant-associated fungi that harbor endocellular bacteria, perform a comparative genomics analysis and provide an evolutionary perspective on fungal-bacterial symbioses
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA No
Is HMP No
ECOSYSTEM CLASSIFICATION
Ecosystem Host-associated
Ecosystem Category Fungi
Ecosystem Type Unclassified
Ecosystem Subtype Unclassified
Specific Ecosystem Unclassified
STUDY COMPOSITION
Number of Biosamples 62
Number of Organisms 8
Number of Seq Projects 69
Number of Analysis Projects 35
Number of Related Studies 0

 

 

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