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Study

Study Name: Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes

Projects

Biosamples

Organisms

Biosamples: 503 Seq. Projects: 503
STUDY INFORMATION
GOLD Study ID Gs0110138
Study Name Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes
Other Names Fungal, bacterial, and archaeal communities mediating C cycling and trace gas flux in peatland ecosystems subject to climate change
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id SRP140810  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40 metagenome
Study Abstract
  
SRA Study Id SRP140814  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40 metagenome
Study Abstract
  
SRA Study Id SRP140813  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10 metagenome
Study Abstract
  
SRA Study Id SRP140811  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100 metagenome
Study Abstract
  
SRA Study Id SRP140807  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100 metagenome
Study Abstract
  
SRA Study Id SRP140806  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150 metagenome
Study Abstract
  
SRA Study Id SRP140805  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40 metagenome
Study Abstract
  
SRA Study Id SRP140804  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40 metagenome
Study Abstract
  
SRA Study Id SRP140808  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10 metagenome
Study Abstract
  
SRA Study Id SRP164178  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG metagenome
Study Abstract
  
SRA Study Id SRP120196  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG metagenome
Study Abstract
  
SRA Study Id SRP140820  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40 metagenome
Study Abstract
  
SRA Study Id SRP140825  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100 metagenome
Study Abstract
  
SRA Study Id SRP140818  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150 metagenome
Study Abstract
  
SRA Study Id SRP140817  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100 metagenome
Study Abstract
  
SRA Study Id SRP111888  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 metagenome
Study Abstract
  
SRA Study Id SRP140815  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150 metagenome
Study Abstract
  
SRA Study Id SRP140819  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10 metagenome
Study Abstract
  
SRA Study Id SRP120195  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG metagenome
Study Abstract
  
SRA Study Id SRP111881  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 metagenome
Study Abstract
  
SRA Study Id SRP120194  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG metagenome
Study Abstract
  
SRA Study Id SRP120193  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG metagenome
Study Abstract
  
SRA Study Id SRP111883  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 metagenome
Study Abstract
  
SRA Study Id SRP120192  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG metagenome
Study Abstract
  
SRA Study Id SRP111882  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100 metagenome
Study Abstract
  
SRA Study Id SRP111885  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 metagenome
Study Abstract
  
SRA Study Id SRP111884  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 metagenome
Study Abstract
  
SRA Study Id SRP120190  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG metagenome
Study Abstract
  
SRA Study Id SRP111887  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 metagenome
Study Abstract
  
SRA Study Id SRP111886  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100 metagenome
Study Abstract
  
SRA Study Id SRP120147  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG metagenome
Study Abstract
  
SRA Study Id SRP120146  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG metagenome
Study Abstract
  
SRA Study Id SRP120144  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG metagenome
Study Abstract
  
SRA Study Id SRP120143  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG metagenome
Study Abstract
  
SRA Study Id SRP137585  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaT
Study Abstract
  
SRA Study Id SRP120141  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG metagenome
Study Abstract
  
SRA Study Id SRP140874  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40 metagenome
Study Abstract
  
SRA Study Id SRP111958  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 metagenome
Study Abstract
  
SRA Study Id SRP111839  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10 metagenome
Study Abstract
  
SRA Study Id SRP137587  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT
Study Abstract
  
SRA Study Id SRP137589  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT
Study Abstract
  
SRA Study Id SRP137591  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT
Study Abstract
  
SRA Study Id SRP137593  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT
Study Abstract
  
SRA Study Id SRP137596  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT
Study Abstract
  
SRA Study Id SRP140803  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150 metagenome
Study Abstract
  
SRA Study Id SRP140802  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100 metagenome
Study Abstract
  
SRA Study Id SRP140801  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10 metagenome
Study Abstract
  
SRA Study Id SRP137598  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT
Study Abstract
  
SRA Study Id SRP118521  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaT metatranscriptome
Study Abstract
  
SRA Study Id SRP118523  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT metatranscriptome
Study Abstract
  
SRA Study Id SRP118522  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT metatranscriptome
Study Abstract
  
SRA Study Id SRP120164  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG metagenome
Study Abstract
  
SRA Study Id SRP120163  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG metagenome
Study Abstract
  
SRA Study Id SRP140854  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40 metagenome
Study Abstract
  
SRA Study Id SRP140853  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10 metagenome
Study Abstract
  
SRA Study Id SRP140858  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100 metagenome
Study Abstract
  
SRA Study Id SRP111850  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 metagenome
Study Abstract
  
SRA Study Id SRP137601  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT
Study Abstract
  
SRA Study Id SRP111852  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150 metagenome
Study Abstract
  
SRA Study Id SRP111851  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100 metagenome
Study Abstract
  
SRA Study Id SRP111853  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 metagenome
Study Abstract
  
SRA Study Id SRP120159  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG metagenome
Study Abstract
  
SRA Study Id SRP140864  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10 metagenome
Study Abstract
  
SRA Study Id SRP140862  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150 metagenome
Study Abstract
  
SRA Study Id SRP140868  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100 metagenome
Study Abstract
  
SRA Study Id SRP140867  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40 metagenome
Study Abstract
  
SRA Study Id SRP140866  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10 metagenome
Study Abstract
  
SRA Study Id SRP111965  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40 metagenome
Study Abstract
  
SRA Study Id SRP111968  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 metagenome
Study Abstract
  
SRA Study Id SRP111847  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 metagenome
Study Abstract
  
SRA Study Id SRP111849  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100 metagenome
Study Abstract
  
SRA Study Id SRP111848  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 metagenome
Study Abstract
  
SRA Study Id SRP111969  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 metagenome
Study Abstract
  
SRA Study Id SRP111960  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 metagenome
Study Abstract
  
SRA Study Id SRP111962  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100 metagenome
Study Abstract
  
SRA Study Id SRP111961  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 metagenome
Study Abstract
  
SRA Study Id SRP111964  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 metagenome
Study Abstract
  
SRA Study Id SRP111963  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40 metagenome
Study Abstract
  
SRA Study Id SRP120189  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG metagenome
Study Abstract
  
SRA Study Id SRP120187  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG metagenome
Study Abstract
  
SRA Study Id SRP118541  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT metatranscriptome
Study Abstract
  
SRA Study Id SRP120185  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG metagenome
Study Abstract
  
SRA Study Id SRP118540  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT metatranscriptome
Study Abstract
  
SRA Study Id SRP140832  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10 metagenome
Study Abstract
  
SRA Study Id SRP140799  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10 metagenome
Study Abstract
  
SRA Study Id SRP140831  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100 metagenome
Study Abstract
  
SRA Study Id SRP140830  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150 metagenome
Study Abstract
  
SRA Study Id SRP140835  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100 metagenome
Study Abstract
  
SRA Study Id SRP140833  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40 metagenome
Study Abstract
  
SRA Study Id SRP111877  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 metagenome
Study Abstract
  
SRA Study Id SRP140828  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40 metagenome
Study Abstract
  
SRA Study Id SRP137707  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG metagenome
Study Abstract
  
SRA Study Id SRP140827  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150 metagenome
Study Abstract
  
SRA Study Id SRP140826  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10 metagenome
Study Abstract
  
SRA Study Id SRP111870  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 metagenome
Study Abstract
  
SRA Study Id SRP111872  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 metagenome
Study Abstract
  
SRA Study Id SRP111871  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 metagenome
Study Abstract
  
SRA Study Id SRP120180  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG metagenome
Study Abstract
  
SRA Study Id SRP111874  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 metagenome
Study Abstract
  
SRA Study Id SRP111873  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 metagenome
Study Abstract
  
SRA Study Id SRP111876  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 metagenome
Study Abstract
  
SRA Study Id SRP111875  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 metagenome
Study Abstract
  
SRA Study Id SRP118532  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT metatranscriptome
Study Abstract
  
SRA Study Id SRP120179  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG metagenome
Study Abstract
  
SRA Study Id SRP118534  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT metatranscriptome
Study Abstract
  
SRA Study Id SRP118533  (Link to NCBI )
Study Title Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT metatranscriptome
Study Abstract
  
SRA Study Id SRP120178  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG metagenome
Study Abstract
  
SRA Study Id SRP120175  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG metagenome
Study Abstract
  
SRA Study Id SRP120174  (Link to NCBI )
Study Title Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG metagenome
Study Abstract
  
SRA Study Id SRP140843  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150 metagenome
Study Abstract
  
SRA Study Id SRP140841  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100 metagenome
Study Abstract
  
SRA Study Id SRP140840  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40 metagenome
Study Abstract
  
SRA Study Id SRP140847  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150 metagenome
Study Abstract
  
SRA Study Id SRP140846  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40 metagenome
Study Abstract
  
SRA Study Id SRP140845  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10 metagenome
Study Abstract
  
SRA Study Id SRP140844  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100 metagenome
Study Abstract
  
SRA Study Id SRP140839  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10 metagenome
Study Abstract
  
SRA Study Id SRP111869  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 metagenome
Study Abstract
  
SRA Study Id SRP140837  (Link to NCBI )
Study Title Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150 metagenome
Study Abstract
  
SRA Study Id SRP111982  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 metagenome
Study Abstract
  
SRA Study Id SRP111861  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_10 metagenome
Study Abstract
  
SRA Study Id SRP111863  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 metagenome
Study Abstract
  
SRA Study Id SRP111985  (Link to NCBI )
Study Title Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 metagenome
Study Abstract
  
Legacy ER Study ID 63520
Legacy GOLD ID Gm0063520
Added By Michelle Isbandi on 2014-01-14
Last Modified By Galina Ovchinnikova on 2017-03-07
PI Erik Lilleskov
Description Peatland ecosystems represent 3-5% of the land surface, but sequester 12-30% of soil organic carbon. However, this very large pool of carbon is vulnerable to oxidation as a function of climate change. Increased temperatures and lowered water tables with climate change or anthropogenic drainage can shift peatlands from being net carbon sinks to net carbon sources, but the rate of carbon loss from peatlands subjected to climate change treatments varies widely. The net effects of increased temperature and decreased water availability in peatlands could drive significant changes in peatland carbon balance and methane efflux directly by accelerating peat oxidation or net primary production, and indirectly by altering plant community composition. Microbial communities involved in C cycling in peatlands have been characterized piecemeal via a variety of approaches, making a comprehensive understanding of community organization and comparison of communities among peatlands impossible. In particular, the relative importance of fungi, bacteria and archaea in peatlands, and the relative importance of free-living heterotrophs vs. mycorrhizal fungi, are poorly understood, but are likely to vary depending on a variety of factors, including dominance of mycorrhizal and non-mycorrhizal hosts, pH, redox potential, carbon quality, phenolic concentrations and nutrient availability. These communities of fungi and bacteria are likely to differ in their expression of extracellular enzymes for mobilization of C. In particular, ericoid mycorrhizal fungi (ErMF), because they receive a labile carbon subsidy from their host plants, may inhibit lignolytic fungi and bacteria in their mycorrhizospheres. However, these ErMF themselves have a broad range of enzyme activity in vitro, producing extracellular enzymes capable of cellulytic and partial lignolytic activity. The in vivo potential and complete suite of extracellular enzymes produced by these fungi is poorly known. Discovery of the potential suite of extracellular enzymes for these organisms will provide the basis for understanding community potential for regulating C cycling. Metatranscriptome analyses will provide us with a foundation for characterizing the functional potential of different microbial communities as they interact with the contrasting environments created by roots of different plant functional groups in interaction with changing temperature and water table. This will serve as the jumping off point for enhanced models of peatland C cycling that incorporate microbial community structure and function. The large scale microbial profiling will be linked to measures of C cycling (CO2 and CH4 flux at a minimum, plus ecosystem C balance, enzyme assays, DOC quantity and quality at some sites) and environmental conditions (pH, Eh, water table height, plant communities, temperature) in order to understand the factors that structure these communities, and test hypotheses and develop models for microbial community regulation of peatland C cycling. The diverse redox conditions experienced by the organisms in these systems generate complex microbial consortia involved in use of a wide array of substrates and electron acceptors. As redox and substrate quality decline with depth generally gradients from aerobic heterotrophs and plant associated organisms at the surface, to organisms using lower energy substrates through fermentative pathways, and methanogens prevail at depth. The organisms along such gradients represent key but poorly understood players in the global balance of C and balance of trace gas fluxes (e.g. CO2 vs CH4) that prevail under changing conditions. Using single cell sequencing techniques we can target taxa active over these steep gradients to improve our understanding of the microbial players and processes that regulate trace gas flux. Of particular interest are those microbes specifically associated with the steep redox gradients associated with plant roots.
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA No
Is HMP No
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Freshwater
Ecosystem Subtype Wetlands
Specific Ecosystem Unclassified
STUDY COMPOSITION
Number of Biosamples 503
Number of Organisms 0
Number of Seq Projects 503
Number of Analysis Projects 554
Number of Related Studies 0

 

 

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