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Study

Study Name: Dark ocean microbial single cell genomics

Projects

Biosamples

Organisms

Biosamples: 0 Seq. Projects: 238
STUDY INFORMATION
GOLD Study ID Gs0011957
Study Name Dark ocean microbial single cell genomics
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject Accession
SRA Studies
SRA Study Id SRP025090  (Link to NCBI )
Study Title bacterium SCGC AAA003-K10 Genome sequencing
Study Abstract
  
SRA Study Id SRP048250  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AB-606-F11 Genome sequencing
Study Abstract
  
SRA Study Id SRP048251  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AB-606-K21 Genome sequencing
Study Abstract
  
SRA Study Id SRP048254  (Link to NCBI )
Study Title Planctomycetes bacterium SCGC AB-629-L23 Genome sequencing
Study Abstract
  
SRA Study Id SRP048252  (Link to NCBI )
Study Title Marinimicrobia bacterium SCGC AB-606-L02 Genome sequencing
Study Abstract
  
SRA Study Id SRP048253  (Link to NCBI )
Study Title Chloroflexi bacterium SCGC AB-629-L07 Genome sequencing
Study Abstract
  
SRA Study Id SRP048258  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AB-633-K11 Genome sequencing
Study Abstract
  
SRA Study Id SRP048259  (Link to NCBI )
Study Title Chloroflexi bacterium SCGC AB-633-M15 Genome sequencing
Study Abstract
  
SRA Study Id SRP048256  (Link to NCBI )
Study Title SAR324 cluster bacterium SCGC AB-629-P02 Genome sequencing
Study Abstract
  
SRA Study Id SRP048257  (Link to NCBI )
Study Title Thaumarchaeota archaeon SCGC AB-633-I03 Genome sequencing
Study Abstract
  
SRA Study Id SRP048240  (Link to NCBI )
Study Title Thaumarchaeota archaeon SCGC AAA286-D17 Genome sequencing
Study Abstract
  
SRA Study Id SRP048243  (Link to NCBI )
Study Title Alphaproteobacteria bacterium SCGC AAA288-C23 Genome sequencing
Study Abstract
  
SRA Study Id SRP048244  (Link to NCBI )
Study Title Planctomycetes bacterium SCGC AAA290-P23 Genome sequencing
Study Abstract
  
SRA Study Id SRP048241  (Link to NCBI )
Study Title SAR324 cluster bacterium SCGC AAA240-G18 Genome sequencing
Study Abstract
  
SRA Study Id SRP048242  (Link to NCBI )
Study Title Nitrospinae bacterium SCGC AAA286-M02 Genome sequencing
Study Abstract
  
SRA Study Id SRP048247  (Link to NCBI )
Study Title SAR324 cluster bacterium SCGC AB-633-K14 Genome sequencing
Study Abstract
  
SRA Study Id SRP048248  (Link to NCBI )
Study Title Verrucomicrobia bacterium SCGC AB-606-A23 Genome sequencing
Study Abstract
  
SRA Study Id SRP048245  (Link to NCBI )
Study Title archaeon SCGC AB-215-J19 Genome sequencing
Study Abstract
  
SRA Study Id SRP048249  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AB-606-B03 Genome sequencing
Study Abstract
  
SRA Study Id SRP048272  (Link to NCBI )
Study Title Nitrospinae bacterium SCGC AC-312-F10 Genome sequencing
Study Abstract
  
SRA Study Id SRP048273  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AC-312-G17 Genome sequencing
Study Abstract
  
SRA Study Id SRP048270  (Link to NCBI )
Study Title SAR324 cluster bacterium SCGC AB-663-L03 Genome sequencing
Study Abstract
  
SRA Study Id SRP048271  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AB-663-P10 Genome sequencing
Study Abstract
  
SRA Study Id SRP048276  (Link to NCBI )
Study Title Marinimicrobia bacterium SCGC AC-337-E02 Genome sequencing
Study Abstract
  
SRA Study Id SRP048277  (Link to NCBI )
Study Title Verrucomicrobia bacterium SCGC AC-312-P03 Genome sequencing
Study Abstract
  
SRA Study Id SRP048310  (Link to NCBI )
Study Title Nitrospirae bacterium SCGC AC-728-O15 Genome sequencing
Study Abstract
  
SRA Study Id SRP048274  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AC-312-J23 Genome sequencing
Study Abstract
  
SRA Study Id SRP048275  (Link to NCBI )
Study Title SAR324 cluster bacterium SCGC AC-337-C05 Genome sequencing
Study Abstract
  
SRA Study Id SRP048313  (Link to NCBI )
Study Title Acidobacteria bacterium SCGC AC-738-L23 Genome sequencing
Study Abstract
  
SRA Study Id SRP048314  (Link to NCBI )
Study Title Deltaproteobacteria bacterium SCGC AC-738-N13 Genome sequencing
Study Abstract
  
SRA Study Id SRP048278  (Link to NCBI )
Study Title Thaumarchaeota archaeon SCGC AC-337-E14 Genome sequencing
Study Abstract
  
SRA Study Id SRP048311  (Link to NCBI )
Study Title SAR324 cluster bacterium SCGC AC-738-K21 Genome sequencing
Study Abstract
  
SRA Study Id SRP048312  (Link to NCBI )
Study Title Thaumarchaeota archaeon SCGC AC-738-L21 Genome sequencing
Study Abstract
  
SRA Study Id SRP048279  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AC-337-K15 Genome sequencing
Study Abstract
  
SRA Study Id SRP048317  (Link to NCBI )
Study Title Planctomycetes bacterium SCGC AD-103-A13 Genome sequencing
Study Abstract
  
SRA Study Id SRP048318  (Link to NCBI )
Study Title Thaumarchaeota archaeon SCGC AD-103-C20 Genome sequencing
Study Abstract
  
SRA Study Id SRP048315  (Link to NCBI )
Study Title Nitrospinae bacterium SCGC AC-738-P20 Genome sequencing
Study Abstract
  
SRA Study Id SRP048316  (Link to NCBI )
Study Title Euryarchaeota archaeon SCGC AC-800-C03 Genome sequencing
Study Abstract
  
SRA Study Id SRP048319  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AD-103-I14 Genome sequencing
Study Abstract
  
SRA Study Id SRP048261  (Link to NCBI )
Study Title SAR324 cluster bacterium SCGC AB-637-A20 Genome sequencing
Study Abstract
  
SRA Study Id SRP048262  (Link to NCBI )
Study Title Marinimicrobia bacterium SCGC AB-637-K02 Genome sequencing
Study Abstract
  
SRA Study Id SRP048265  (Link to NCBI )
Study Title SAR324 cluster bacterium SCGC AB-661-B14 Genome sequencing
Study Abstract
  
SRA Study Id SRP048266  (Link to NCBI )
Study Title Verrucomicrobia bacterium SCGC AB-661-L11 Genome sequencing
Study Abstract
  
SRA Study Id SRP048263  (Link to NCBI )
Study Title Thaumarchaeota archaeon SCGC AB-637-K21 Genome sequencing
Study Abstract
  
SRA Study Id SRP048264  (Link to NCBI )
Study Title Euryarchaeota archaeon SCGC AB-637-M03 Genome sequencing
Study Abstract
  
SRA Study Id SRP048302  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AC-724-E08 Genome sequencing
Study Abstract
  
SRA Study Id SRP048269  (Link to NCBI )
Study Title Euryarchaeota archaeon SCGC AB-663-I06 Genome sequencing
Study Abstract
  
SRA Study Id SRP048303  (Link to NCBI )
Study Title Bacteroidetes bacterium SCGC AC-724-E10 Genome sequencing
Study Abstract
  
SRA Study Id SRP048300  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AC-724-D06 Genome sequencing
Study Abstract
  
SRA Study Id SRP048267  (Link to NCBI )
Study Title Verrucomicrobia bacterium SCGC AB-661-P22 Genome sequencing
Study Abstract
  
SRA Study Id SRP048268  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AB-663-D05 Genome sequencing
Study Abstract
  
SRA Study Id SRP048301  (Link to NCBI )
Study Title Bacteroidetes bacterium SCGC AC-724-E07 Genome sequencing
Study Abstract
  
SRA Study Id SRP048306  (Link to NCBI )
Study Title Thaumarchaeota archaeon SCGC AC-728-E05 Genome sequencing
Study Abstract
  
SRA Study Id SRP048307  (Link to NCBI )
Study Title Nitrospinae bacterium SCGC AC-728-G23 Genome sequencing
Study Abstract
  
SRA Study Id SRP048304  (Link to NCBI )
Study Title Lentisphaerae bacterium SCGC AC-724-F15 Genome sequencing
Study Abstract
  
SRA Study Id SRP048305  (Link to NCBI )
Study Title Acidobacteria bacterium SCGC AC-724-N18 Genome sequencing
Study Abstract
  
SRA Study Id SRP048308  (Link to NCBI )
Study Title Nitrospirae bacterium SCGC AC-732-L14 Genome sequencing
Study Abstract
  
SRA Study Id SRP048309  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AC-732-J09 Genome sequencing
Study Abstract
  
SRA Study Id SRP048291  (Link to NCBI )
Study Title Marinimicrobia bacterium SCGC AC-657-P11 Genome sequencing
Study Abstract
  
SRA Study Id SRP048294  (Link to NCBI )
Study Title Thaumarchaeota archaeon SCGC AC-665-D05 Genome sequencing
Study Abstract
  
SRA Study Id SRP048295  (Link to NCBI )
Study Title Thaumarchaeota archaeon SCGC AC-665-E06 Genome sequencing
Study Abstract
  
SRA Study Id SRP048292  (Link to NCBI )
Study Title Bacteroidetes bacterium SCGC AC-661-I21 Genome sequencing
Study Abstract
  
SRA Study Id SRP048293  (Link to NCBI )
Study Title Verrucomicrobia bacterium SCGC AC-661-N10 Genome sequencing
Study Abstract
  
SRA Study Id SRP048298  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AC-665-K23 Genome sequencing
Study Abstract
  
SRA Study Id SRP048331  (Link to NCBI )
Study Title Nitrospinae bacterium SCGC AD-150-O19 Genome sequencing
Study Abstract
  
SRA Study Id SRP048332  (Link to NCBI )
Study Title Alphaproteobacteria bacterium SCGC AD-259-A09 Genome sequencing
Study Abstract
  
SRA Study Id SRP048299  (Link to NCBI )
Study Title Thaumarchaeota archaeon SCGC AC-665-L14 Genome sequencing
Study Abstract
  
SRA Study Id SRP048296  (Link to NCBI )
Study Title Acidobacteria bacterium SCGC AC-665-F06 Genome sequencing
Study Abstract
  
SRA Study Id SRP048297  (Link to NCBI )
Study Title Thaumarchaeota archaeon SCGC AC-665-F20 Genome sequencing
Study Abstract
  
SRA Study Id SRP048330  (Link to NCBI )
Study Title Nitrospinae bacterium SCGC AD-129-P22 Genome sequencing
Study Abstract
  
SRA Study Id SRP048335  (Link to NCBI )
Study Title Thaumarchaeota archaeon SCGC AD-117-G06 Genome sequencing
Study Abstract
  
SRA Study Id SRP048336  (Link to NCBI )
Study Title Nitrospinae bacterium SCGC AD-259-M10 Genome sequencing
Study Abstract
  
SRA Study Id SRP048333  (Link to NCBI )
Study Title Euryarchaeota archaeon SCGC AD-259-C07 Genome sequencing
Study Abstract
  
SRA Study Id SRP048334  (Link to NCBI )
Study Title Thaumarchaeota archaeon SCGC AD-259-M03 Genome sequencing
Study Abstract
  
SRA Study Id SRP025057  (Link to NCBI )
Study Title Gemmatimonadetes bacterium SCGC AAA007-L19 Genome sequencing
Study Abstract
  
SRA Study Id SRP048339  (Link to NCBI )
Study Title Euryarchaeota archaeon SCGC AD-261-K09 Genome sequencing
Study Abstract
  
SRA Study Id SRP048337  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AD-259-O14 Genome sequencing
Study Abstract
  
SRA Study Id SRP048338  (Link to NCBI )
Study Title Nitrospinae bacterium SCGC AD-261-E20 Genome sequencing
Study Abstract
  
SRA Study Id SRP048280  (Link to NCBI )
Study Title Planctomycetes bacterium SCGC AC-407-K21 Genome sequencing
Study Abstract
  
SRA Study Id SRP048283  (Link to NCBI )
Study Title Marinimicrobia bacterium SCGC AC-647-M11 Genome sequencing
Study Abstract
  
SRA Study Id SRP048284  (Link to NCBI )
Study Title SAR324 cluster bacterium SCGC AC-647-N02 Genome sequencing
Study Abstract
  
SRA Study Id SRP048281  (Link to NCBI )
Study Title Chloroflexi bacterium SCGC AC-407-O22 Genome sequencing
Study Abstract
  
SRA Study Id SRP048282  (Link to NCBI )
Study Title Acidobacteria bacterium SCGC AC-409-B06 Genome sequencing
Study Abstract
  
SRA Study Id SRP048320  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AD-103-K02 Genome sequencing
Study Abstract
  
SRA Study Id SRP048287  (Link to NCBI )
Study Title Alphaproteobacteria bacterium SCGC AC-649-N11 Genome sequencing
Study Abstract
  
SRA Study Id SRP025060  (Link to NCBI )
Study Title Actinobacteria bacterium SCGC AAA007-J07 Genome sequencing
Study Abstract
  
SRA Study Id SRP048288  (Link to NCBI )
Study Title Bacteroidetes bacterium SCGC AC-657-D23 Genome sequencing
Study Abstract
  
SRA Study Id SRP048321  (Link to NCBI )
Study Title bacterium SCGC AD-105-B22 Genome sequencing
Study Abstract
  
SRA Study Id SRP048285  (Link to NCBI )
Study Title Nitrospinae bacterium SCGC AC-649-C23 Genome sequencing
Study Abstract
  
SRA Study Id SRP048286  (Link to NCBI )
Study Title Deferribacteres bacterium SCGC AC-649-F05 Genome sequencing
Study Abstract
  
SRA Study Id SRP048324  (Link to NCBI )
Study Title Lentisphaerae bacterium SCGC AD-113-B08 Genome sequencing
Study Abstract
  
SRA Study Id SRP048325  (Link to NCBI )
Study Title Thaumarchaeota archaeon SCGC AD-113-N16 Genome sequencing
Study Abstract
  
SRA Study Id SRP048289  (Link to NCBI )
Study Title Euryarchaeota archaeon SCGC AC-657-J18 Genome sequencing
Study Abstract
  
SRA Study Id SRP048322  (Link to NCBI )
Study Title Verrucomicrobia bacterium SCGC AD-105-D22 Genome sequencing
Study Abstract
  
SRA Study Id SRP048323  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AD-113-N02 Genome sequencing
Study Abstract
  
SRA Study Id SRP048328  (Link to NCBI )
Study Title SAR324 cluster bacterium SCGC AD-131-D23 Genome sequencing
Study Abstract
  
SRA Study Id SRP048329  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AD-150-G13 Genome sequencing
Study Abstract
  
SRA Study Id SRP048327  (Link to NCBI )
Study Title Planctomycetes bacterium SCGC AD-117-F11 Genome sequencing
Study Abstract
  
SRA Study Id SRP048232  (Link to NCBI )
Study Title Chloroflexi bacterium SCGC AAA240-P09 Genome sequencing
Study Abstract
  
SRA Study Id SRP048233  (Link to NCBI )
Study Title Euryarchaeota archaeon SCGC AAA242-N05 Genome sequencing
Study Abstract
  
SRA Study Id SRP048230  (Link to NCBI )
Study Title Marinimicrobia bacterium SCGC AAA240-L11 Genome sequencing
Study Abstract
  
SRA Study Id SRP048231  (Link to NCBI )
Study Title Verrucomicrobia bacterium SCGC AAA240-M19 Genome sequencing
Study Abstract
  
SRA Study Id SRP048236  (Link to NCBI )
Study Title SAR324 cluster bacterium SCGC AAA282-E05 Genome sequencing
Study Abstract
  
SRA Study Id SRP048237  (Link to NCBI )
Study Title Alphaproteobacteria bacterium SCGC AAA282-E08 Genome sequencing
Study Abstract
  
SRA Study Id SRP048234  (Link to NCBI )
Study Title Verrucomicrobia bacterium SCGC AAA242-O13 Genome sequencing
Study Abstract
  
SRA Study Id SRP048235  (Link to NCBI )
Study Title Alphaproteobacteria bacterium SCGC AAA242-P09 Genome sequencing
Study Abstract
  
SRA Study Id SRP048238  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AAA283-E16 Genome sequencing
Study Abstract
  
SRA Study Id SRP048239  (Link to NCBI )
Study Title Bacteroidetes bacterium SCGC AAA285-F05 Genome sequencing
Study Abstract
  
SRA Study Id SRP024948  (Link to NCBI )
Study Title Gemmatimonadetes bacterium SCGC AAA007-O21 Genome sequencing
Study Abstract
  
SRA Study Id SRP024944  (Link to NCBI )
Study Title Planctomycetes bacterium SCGC AAA240-F15
Study Abstract
  
SRA Study Id SRP048342  (Link to NCBI )
Study Title Euryarchaeota archaeon SCGC AD-263-G18 Genome sequencing
Study Abstract
  
SRA Study Id SRP048343  (Link to NCBI )
Study Title Euryarchaeota archaeon SCGC AD-263-N20 Genome sequencing
Study Abstract
  
SRA Study Id SRP048340  (Link to NCBI )
Study Title Deltaproteobacteria bacterium SCGC AD-261-P23 Genome sequencing
Study Abstract
  
SRA Study Id SRP048341  (Link to NCBI )
Study Title Deltaproteobacteria bacterium SCGC AD-263-B17 Genome sequencing
Study Abstract
  
SRA Study Id SRP048346  (Link to NCBI )
Study Title Marinimicrobia bacterium SCGC AD-265-B15 Genome sequencing
Study Abstract
  
SRA Study Id SRP048347  (Link to NCBI )
Study Title Alphaproteobacteria bacterium SCGC AD-265-B03 Genome sequencing
Study Abstract
  
SRA Study Id SRP048344  (Link to NCBI )
Study Title Acidobacteria bacterium SCGC AD-263-O20 Genome sequencing
Study Abstract
  
SRA Study Id SRP048345  (Link to NCBI )
Study Title Alphaproteobacteria bacterium SCGC AD-265-B05 Genome sequencing
Study Abstract
  
SRA Study Id SRP048229  (Link to NCBI )
Study Title Gammaproteobacteria bacterium SCGC AAA240-I17 Genome sequencing
Study Abstract
  
SRA Study Id SRP048227  (Link to NCBI )
Study Title Chloroflexi bacterium SCGC AAA001-C21 Genome sequencing
Study Abstract
  
SRA Study Id SRP048348  (Link to NCBI )
Study Title Verrucomicrobia bacterium SCGC AD-265-E10 Genome sequencing
Study Abstract
  
SRA Study Id SRP048228  (Link to NCBI )
Study Title Nitrospinae bacterium SCGC AAA008-D05 Genome sequencing
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2012-01-27
Last Modified By
PI Ramunas Stepanauskas
Description
Relevance
Study Information Visibility Public
Metagenomic Study No
Publication
Is GEBA No
Is HMP No
ECOSYSTEM CLASSIFICATION
Ecosystem
Ecosystem Category
Ecosystem Type
Ecosystem Subtype
Specific Ecosystem
Ecosystem Path ID
STUDY COMPOSITION
Number of Biosamples 0
Number of Organisms 236
Number of Seq Projects 238
Number of Analysis Projects 240
Number of Related Studies 0

 

 

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