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Study

Study Name: Sediment chemolithoautotrophic microbial communities from various locations

Projects

Biosamples

Organisms

Biosamples: 135 Seq. Projects: 135
STUDY INFORMATION
GOLD Study ID Gs0135889
Study Name Sediment chemolithoautotrophic microbial communities from various locations
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id SRP198139  (Link to NCBI )
Study Title Coastal sediment microbial communities from Maine, United States - Phippsburg sediment 1 metagenome
Study Abstract
  
SRA Study Id SRP198136  (Link to NCBI )
Study Title Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 metagenome
Study Abstract
  
SRA Study Id SRP198146  (Link to NCBI )
Study Title Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxic metagenome
Study Abstract
  
SRA Study Id SRP198135  (Link to NCBI )
Study Title Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1 metagenome
Study Abstract
  
SRA Study Id SRP198138  (Link to NCBI )
Study Title Coastal sediment microbial communities from Maine, United States - Cross River sediment 1 metagenome
Study Abstract
  
SRA Study Id SRP198149  (Link to NCBI )
Study Title Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrow metagenome
Study Abstract
  
SRA Study Id SRP198137  (Link to NCBI )
Study Title Coastal sediment microbial communities from Maine, United States - Merrow Island worm burrow metagenome
Study Abstract
  
SRA Study Id SRP198148  (Link to NCBI )
Study Title Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite metagenome
Study Abstract
  
SRA Study Id SRP257247  (Link to NCBI )
Study Title Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS worm burrow well 6 metagenome
Study Abstract
  
SRA Study Id SRP198143  (Link to NCBI )
Study Title Coastal sediment microbial communities from Maine, United States - Eddy sediment 2 cm metagenome
Study Abstract
  
SRA Study Id SRP213567  (Link to NCBI )
Study Title Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 cm metagenome
Study Abstract
  
SRA Study Id SRP198154  (Link to NCBI )
Study Title Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month chalcopyrite metagenome
Study Abstract
  
SRA Study Id SRP198153  (Link to NCBI )
Study Title Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-week pyrite metagenome
Study Abstract
  
SRA Study Id SRP198142  (Link to NCBI )
Study Title Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2 metagenome
Study Abstract
  
SRA Study Id SRP213565  (Link to NCBI )
Study Title Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A oxic metagenome
Study Abstract
  
SRA Study Id SRP198156  (Link to NCBI )
Study Title Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Catalina island, California, United States - Pyrrhotite metagenome
Study Abstract
  
SRA Study Id SRP198155  (Link to NCBI )
Study Title Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month chalcopyrite metagenome
Study Abstract
  
SRA Study Id SRP213563  (Link to NCBI )
Study Title Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 1 metagenome
Study Abstract
  
SRA Study Id SRP198160  (Link to NCBI )
Study Title Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2 metagenome
Study Abstract
  
SRA Study Id SRP198152  (Link to NCBI )
Study Title Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrite metagenome
Study Abstract
  
SRA Study Id SRP198141  (Link to NCBI )
Study Title Coastal sediment microbial communities from Maine, United States - Lowes Cove worm burrow metagenome
Study Abstract
  
SRA Study Id SRP198151  (Link to NCBI )
Study Title Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrite metagenome
Study Abstract
  
SRA Study Id SRP198140  (Link to NCBI )
Study Title Coastal sediment microbial communities from Maine, United States - Phippsburg worm burrow 1 metagenome
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2018-10-11
Last Modified By JGI automated process on 2019-09-06
PI Jake Beam
Description This study is focused on microaerobic, autotrophic microorganisms that utilize Fe and S as energy sources and have direct/indirect impacts on the cycling of carbon and phosphorous. The main goal is to explore how both the microbial Fe and S cycles are affected by bioturbation in sediments.
Relevance
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Sediment
Ecosystem Subtype Unclassified
Specific Ecosystem Unclassified
STUDY COMPOSITION
Number of Biosamples 135
Number of Organisms 0
Number of Seq Projects 135
Number of Analysis Projects 135
Number of Related Studies 0

 

 

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