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Study

Study Name: Investigating the transcriptional response of Pseudomonas simiae WCS417 to novel specialized plant metabolites.

Projects

Biosamples

Organisms

Biosamples: 0 Seq. Projects: 144
STUDY INFORMATION
GOLD Study ID Gs0135837
Study Name Investigating the transcriptional response of Pseudomonas simiae WCS417 to novel specialized plant metabolites.
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id SRP196137
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - pqqC_29-4
Study Abstract
  
SRA Study Id SRP196138
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - pqqC_30-1
Study Abstract
  
SRA Study Id SRP196127
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - WCS417_31-2
Study Abstract
  
SRA Study Id SRP196128
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - WCS417_31-3
Study Abstract
  
SRA Study Id SRP196139
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - pqqC_32-4
Study Abstract
  
SRA Study Id SRP196129
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - pqqC_30-3
Study Abstract
  
SRA Study Id SRP196133
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - pqqC_32-1
Study Abstract
  
SRA Study Id SRP196134
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - pqqC_29-3
Study Abstract
  
SRA Study Id SRP196135
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - pqqC_29-2
Study Abstract
  
SRA Study Id SRP196136
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - pqqC_29-1
Study Abstract
  
SRA Study Id SRP196140
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - WCS417_31-4
Study Abstract
  
SRA Study Id SRP196130
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - pqqC_30-2
Study Abstract
  
SRA Study Id SRP196141
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - pqqC_30-4
Study Abstract
  
SRA Study Id SRP196131
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - pqqC_32-3
Study Abstract
  
SRA Study Id SRP196142
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - WCS417_31-1
Study Abstract
  
SRA Study Id SRP196132
Study Title Pseudomonas simiae WCS417 pqqC::Tn transcriptome - pqqC_32-2
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2018-09-22
Last Modified By JGI automated process on 2019-06-16
PI Mathias Voges
Description RNA sequencing of the Pseudomonas simiae WCS417 strains induced by specialized metabolites exuded by plant roots to determine if these compounds play a role in plant-microbe signaling, define the transcriptional response to these compounds in a rhizosphere microbe, and discover novel genes involved in producing otherwise cryptic bacterial secondary metabolites.
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study No
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem
Ecosystem Category
Ecosystem Type
Ecosystem Subtype
Specific Ecosystem
STUDY COMPOSITION
Number of Biosamples 0
Number of Organisms 3
Number of Seq Projects 144
Number of Analysis Projects 0
Number of Related Studies 0

 

 

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