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Study

Study Name: Comprehensive metagenome and single cell genome sequencing from the open ocean community of North Pacfic Subtropical Gyre, Station ALOHA

Projects

Biosamples

Organisms

Biosamples: 5 Seq. Projects: 364
STUDY INFORMATION
GOLD Study ID Gs0128773
Study Name Comprehensive metagenome and single cell genome sequencing from the open ocean community of North Pacfic Subtropical Gyre, Station ALOHA
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id SRP120246
Study Title Rhodospirillaceae bacterium strain:JGI 01_H4 Genome sequencing
Study Abstract
  
SRA Study Id SRP194558
Study Title Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG metagenome
Study Abstract
  
SRA Study Id SRP166525
Study Title Gemmatimonadales bacterium strain:JGI 01_H16 Genome sequencing
Study Abstract
  
SRA Study Id SRP166526
Study Title Gemmatimonadales bacterium strain:JGI 01_G21 Genome sequencing
Study Abstract
  
SRA Study Id SRP183701
Study Title Thermoplasmata archaeon JGI 04_M4 Genome sequencing
Study Abstract
  
SRA Study Id SRP183667
Study Title Acidobacterium sp. JGI 01_L10 Genome sequencing
Study Abstract
  
SRA Study Id SRP128242
Study Title Planctomycetales bacterium strain:JGI 01_E22 Genome sequencing
Study Abstract
  
SRA Study Id SRP183664
Study Title Deferribacterales bacterium JGI 01_E17 Genome sequencing
Study Abstract
  
SRA Study Id SRP183663
Study Title Thaumarchaeota archaeon JGI 01_B9 Genome sequencing
Study Abstract
  
SRA Study Id SRP183666
Study Title Deferribacterales bacterium JGI 01_L8 Genome sequencing
Study Abstract
  
SRA Study Id SRP183665
Study Title Deferribacterales bacterium JGI 01_B14 Genome sequencing
Study Abstract
  
SRA Study Id SRP183660
Study Title Oceanospirillales bacterium JGI 02_K4 Genome sequencing
Study Abstract
  
SRA Study Id SRP183662
Study Title Thaumarchaeota archaeon JGI 01_K7 Genome sequencing
Study Abstract
  
SRA Study Id SRP183661
Study Title Alcanivorax sp. JGI 01_B19 Genome sequencing
Study Abstract
  
SRA Study Id SRP152649
Study Title Acidimicrobiales bacterium strain:JGI 02_G18 Genome sequencing
Study Abstract
  
SRA Study Id SRP120236
Study Title Salinisphaeraceae bacterium strain:JGI 01_B7 Genome sequencing
Study Abstract
  
SRA Study Id SRP120235
Study Title Synechococcus sp. JGI 02_L19 Genome sequencing
Study Abstract
  
SRA Study Id SRP120234
Study Title Rhodospirillaceae bacterium strain:JGI 01_D15 Genome sequencing
Study Abstract
  
SRA Study Id SRP120233
Study Title Rhodospirillaceae bacterium strain:JGI 02_D1 Genome sequencing
Study Abstract
  
SRA Study Id SRP194564
Study Title Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG metagenome
Study Abstract
  
SRA Study Id SRP120231
Study Title Rhodobacteraceae bacterium strain:JGI 02_G21 Genome sequencing
Study Abstract
  
SRA Study Id SRP120230
Study Title Synechococcus sp. JGI 01_L8 Genome sequencing
Study Abstract
  
SRA Study Id SRP194560
Study Title Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG metagenome
Study Abstract
  
SRA Study Id SRP128239
Study Title Planctomycetales bacterium strain:JGI 01_G17 Genome sequencing
Study Abstract
  
SRA Study Id SRP120238
Study Title Xanthomonadales bacterium strain:JGI 01_C9 Genome sequencing
Study Abstract
  
SRA Study Id SRP120237
Study Title Rhodospirillaceae bacterium strain:JGI 01_I5 Genome sequencing
Study Abstract
  
SRA Study Id SRP183679
Study Title Pseudomonas sp. JGI 01_B18 Genome sequencing
Study Abstract
  
SRA Study Id SRP135635
Study Title Bacteriovoracaceae bacterium JGI 01_F13 Genome sequencing
Study Abstract
  
SRA Study Id SRP183678
Study Title Nitratireductor sp. JGI 01_K17 Genome sequencing
Study Abstract
  
SRA Study Id SRP135634
Study Title Desulfuromonadales bacterium strain:JGI 02_F19 Genome sequencing
Study Abstract
  
SRA Study Id SRP183675
Study Title Alcanivorax sp. JGI 01_E21 Genome sequencing
Study Abstract
  
SRA Study Id SRP183674
Study Title Nitrospina sp. JGI 01_F9 Genome sequencing
Study Abstract
  
SRA Study Id SRP183677
Study Title Deferribacterales bacterium JGI 01_B13 Genome sequencing
Study Abstract
  
SRA Study Id SRP183676
Study Title Gammaproteobacteria bacterium bacterium JGI 01_I18 Genome sequencing
Study Abstract
  
SRA Study Id SRP183671
Study Title Thaumarchaeota archaeon JGI 01_M10 Genome sequencing
Study Abstract
  
SRA Study Id SRP183670
Study Title OCS116 cluster bacterium JGI 01_D5 Genome sequencing
Study Abstract
  
SRA Study Id SRP183673
Study Title Pseudospirillum sp. JGI 01_E16 Genome sequencing
Study Abstract
  
SRA Study Id SRP183672
Study Title Alcanivorax sp. JGI 01_H12 Genome sequencing
Study Abstract
  
SRA Study Id SRP194570
Study Title Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG metagenome
Study Abstract
  
SRA Study Id SRP183689
Study Title SAR324 cluster bacterium JGI 01_D21 Genome sequencing
Study Abstract
  
SRA Study Id SRP183686
Study Title Nitrosopumilus sp. JGI 01_M11 Genome sequencing
Study Abstract
  
SRA Study Id SRP183685
Study Title Deferribacterales bacterium JGI 01_D17 Genome sequencing
Study Abstract
  
SRA Study Id SRP183688
Study Title Deferribacterales bacterium JGI 02_C18 Genome sequencing
Study Abstract
  
SRA Study Id SRP183684
Study Title Deferribacterales bacterium JGI 01_I18 Genome sequencing
Study Abstract
  
SRA Study Id SRP183683
Study Title Oceanospirillales bacterium JGI 01_M11 Genome sequencing
Study Abstract
  
SRA Study Id SRP183697
Study Title Thermoplasmata archaeon JGI 04_F20 Genome sequencing
Study Abstract
  
SRA Study Id SRP183692
Study Title Deferribacterales bacterium JGI 01_J17 Genome sequencing
Study Abstract
  
SRA Study Id SRP183691
Study Title SAR324 cluster bacterium JGI 01_E15 Genome sequencing
Study Abstract
  
SRA Study Id SRP183690
Study Title Nitrosopumilus sp. JGI 01_H8 Genome sequencing
Study Abstract
  
SRA Study Id SRP175600
Study Title Candidatus Pelagibacter sp. JGI S72_01_I11 Genome sequencing
Study Abstract
  
SRA Study Id SRP175601
Study Title Candidatus Pelagibacter sp. JGI 01_E11 Genome sequencing
Study Abstract
  
SRA Study Id SRP175602
Study Title Candidatus Pelagibacter sp. JGI 01_K20 Genome sequencing
Study Abstract
  
SRA Study Id SRP175604
Study Title Candidatus Pelagibacter sp. JGI 01_D17 Genome sequencing
Study Abstract
  
SRA Study Id SRP175605
Study Title Candidatus Pelagibacter sp. JGI 01_E6 Genome sequencing
Study Abstract
  
SRA Study Id SRP175606
Study Title Candidatus Pelagibacter sp. JGI 01_C18 Genome sequencing
Study Abstract
  
SRA Study Id SRP175607
Study Title Candidatus Pelagibacter sp. JGI 01_J5 Genome sequencing
Study Abstract
  
SRA Study Id SRP175608
Study Title Candidatus Pelagibacter sp. JGI 01_H19 Genome sequencing
Study Abstract
  
SRA Study Id SRP175609
Study Title Candidatus Pelagibacter sp. JGI 01_J12 Genome sequencing
Study Abstract
  
SRA Study Id SRP183629
Study Title Thermoplasmatales archaeon JGI 01_G12 Genome sequencing
Study Abstract
  
SRA Study Id SRP183635
Study Title Marinoscillum sp. JGI 01_I16 Genome sequencing
Study Abstract
  
SRA Study Id SRP183634
Study Title Thermoplasmatales archaeon JGI 01_H15 Genome sequencing
Study Abstract
  
SRA Study Id SRP183637
Study Title Candidatus Puniceispirillum sp. JGI 01_H22 Genome sequencing
Study Abstract
  
SRA Study Id SRP183636
Study Title Candidatus Puniceispirillum sp. JGI 01_H13 Genome sequencing
Study Abstract
  
SRA Study Id SRP183631
Study Title Thermoplasmatales archaeon JGI 01_J6 Genome sequencing
Study Abstract
  
SRA Study Id SRP183630
Study Title Thermoplasmatales archaeon JGI 01_E10 Genome sequencing
Study Abstract
  
SRA Study Id SRP183633
Study Title Marinoscillum sp. JGI 01_J22 Genome sequencing
Study Abstract
  
SRA Study Id SRP183632
Study Title Thermoplasmatales archaeon JGI 01_D22 Genome sequencing
Study Abstract
  
SRA Study Id SRP175612
Study Title Candidatus Pelagibacter sp. JGI 02_G5 Genome sequencing
Study Abstract
  
SRA Study Id SRP175613
Study Title Candidatus Pelagibacter sp. JGI 01_M13 Genome sequencing
Study Abstract
  
SRA Study Id SRP175614
Study Title Candidatus Pelagibacter sp. JGI 02_D15 Genome sequencing
Study Abstract
  
SRA Study Id SRP120225
Study Title Rhodobacteraceae bacterium strain:JGI 02_K22 Genome sequencing
Study Abstract
  
SRA Study Id SRP120224
Study Title Oceanospirillales bacterium strain:JGI 02_L14 Genome sequencing
Study Abstract
  
SRA Study Id SRP120223
Study Title Synechococcus sp. JGI 01_L10 Genome sequencing
Study Abstract
  
SRA Study Id SRP120222
Study Title Synechococcus sp. JGI 01_K19 Genome sequencing
Study Abstract
  
SRA Study Id SRP124421
Study Title Rhodospirillaceae bacterium strain:JGI 01_E12 Genome sequencing
Study Abstract
  
SRA Study Id SRP124420
Study Title Flavobacteriaceae bacterium strain:JGI 02_G12 Genome sequencing
Study Abstract
  
SRA Study Id SRP124423
Study Title Flavobacteriaceae bacterium strain:JGI 04_M18 Genome sequencing
Study Abstract
  
SRA Study Id SRP124422
Study Title Flavobacteriaceae bacterium strain:JGI 04_M9 Genome sequencing
Study Abstract
  
SRA Study Id SRP124425
Study Title Salinisphaeraceae bacterium strain:JGI 01_D22 Genome sequencing
Study Abstract
  
SRA Study Id SRP183639
Study Title SAR324 cluster bacterium JGI 01_I19 Genome sequencing
Study Abstract
  
SRA Study Id SRP120229
Study Title Rhodospirillaceae bacterium strain:JGI 02_K17 Genome sequencing
Study Abstract
  
SRA Study Id SRP183638
Study Title Methylomonas sp. JGI 01_C17 Genome sequencing
Study Abstract
  
SRA Study Id SRP120228
Study Title Rhodospirillaceae bacterium strain:JGI 02_H19 Genome sequencing
Study Abstract
  
SRA Study Id SRP124424
Study Title Flavobacteriaceae bacterium strain:JGI 04_N16 Genome sequencing
Study Abstract
  
SRA Study Id SRP120227
Study Title Rhodobacteraceae bacterium strain:JGI 02_J20 Genome sequencing
Study Abstract
  
SRA Study Id SRP124426
Study Title Xanthomonadales bacterium strain:JGI 01_F21 Genome sequencing
Study Abstract
  
SRA Study Id SRP120226
Study Title Prochlorococcus sp. JGI 02_N10 Genome sequencing
Study Abstract
  
SRA Study Id SRP183645
Study Title Deferribacterales bacterium JGI 01_K18 Genome sequencing
Study Abstract
  
SRA Study Id SRP183648
Study Title Thaumarchaeota archaeon JGI 02_H7 Genome sequencing
Study Abstract
  
SRA Study Id SRP183642
Study Title Thermoplasmatales archaeal group 2 archaeon JGI 02_E19 Genome sequencing
Study Abstract
  
SRA Study Id SRP183641
Study Title Oceanospirillales bacterium JGI 01_C21 Genome sequencing
Study Abstract
  
SRA Study Id SRP175586
Study Title Candidatus Pelagibacter sp. JGI 01_I11 Genome sequencing
Study Abstract
  
SRA Study Id SRP175587
Study Title Candidatus Pelagibacter sp. JGI 01_J17 Genome sequencing
Study Abstract
  
SRA Study Id SRP183644
Study Title Deferribacterales bacterium JGI 01_K13 Genome sequencing
Study Abstract
  
SRA Study Id SRP175588
Study Title Candidatus Pelagibacter sp. JGI 01_F14 Genome sequencing
Study Abstract
  
SRA Study Id SRP183640
Study Title Deferribacterales bacterium JGI 01_J15 Genome sequencing
Study Abstract
  
SRA Study Id SRP120214
Study Title Rhodospirillaceae bacterium strain:JGI 01_K15 Genome sequencing
Study Abstract
  
SRA Study Id SRP120213
Study Title Prochlorococcus sp. JGI 01_M5 Genome sequencing
Study Abstract
  
SRA Study Id SRP166535
Study Title Gemmatimonadales bacterium strain:JGI 01_J4 Genome sequencing
Study Abstract
  
SRA Study Id SRP120219
Study Title Rhodospirillaceae bacterium strain:JGI 01_I15 Genome sequencing
Study Abstract
  
SRA Study Id SRP124414
Study Title Flavobacteriaceae bacterium strain:JGI 02_E13 Genome sequencing
Study Abstract
  
SRA Study Id SRP183649
Study Title Thermoplasmatales archaeal group 2 archaeon JGI 02_J17 Genome sequencing
Study Abstract
  
SRA Study Id SRP175590
Study Title Candidatus Pelagibacter sp. JGI 01_H21 Genome sequencing
Study Abstract
  
SRA Study Id SRP175591
Study Title Candidatus Pelagibacter sp. JGI 01_H5 Genome sequencing
Study Abstract
  
SRA Study Id SRP183656
Study Title Bdellovibrionaceae bacterium JGI 02_L10 Genome sequencing
Study Abstract
  
SRA Study Id SRP175594
Study Title Candidatus Pelagibacter sp. JGI 02_F17 Genome sequencing
Study Abstract
  
SRA Study Id SRP175595
Study Title Candidatus Pelagibacter sp. JGI 02_I9 Genome sequencing
Study Abstract
  
SRA Study Id SRP152652
Study Title Acidimicrobiales bacterium strain:JGI 01_L21 Genome sequencing
Study Abstract
  
SRA Study Id SRP183653
Study Title Bdellovibrionaceae bacterium JGI 02_C14 Genome sequencing
Study Abstract
  
SRA Study Id SRP175596
Study Title Candidatus Pelagibacter sp. JGI 02_H13 Genome sequencing
Study Abstract
  
SRA Study Id SRP175597
Study Title Candidatus Pelagibacter sp. JGI 01_E16 Genome sequencing
Study Abstract
  
SRA Study Id SRP183652
Study Title Deferribacterales bacterium JGI 02_F21 Genome sequencing
Study Abstract
  
SRA Study Id SRP152653
Study Title Acidimicrobiales bacterium strain:JGI 01_K9 Genome sequencing
Study Abstract
  
SRA Study Id SRP183655
Study Title SAR324 cluster bacterium JGI 02_D19 Genome sequencing
Study Abstract
  
SRA Study Id SRP152650
Study Title Acidimicrobiales bacterium strain:JGI 01_D11 Genome sequencing
Study Abstract
  
SRA Study Id SRP175598
Study Title Candidatus Pelagibacter sp. JGI 02_K11 Genome sequencing
Study Abstract
  
SRA Study Id SRP183654
Study Title Deferribacterales bacterium JGI 02_D13 Genome sequencing
Study Abstract
  
SRA Study Id SRP175599
Study Title Candidatus Pelagibacter sp. JGI 01_E9 Genome sequencing
Study Abstract
  
SRA Study Id SRP152656
Study Title Acidimicrobiales bacterium strain:JGI 02_F18 Genome sequencing
Study Abstract
  
SRA Study Id SRP152654
Study Title Acidimicrobiales bacterium strain:JGI 01_E13 Genome sequencing
Study Abstract
  
SRA Study Id SRP183651
Study Title Deferribacterales bacterium JGI 02_G14 Genome sequencing
Study Abstract
  
SRA Study Id SRP152655
Study Title Acidimicrobiales bacterium strain:JGI _01_G15 Genome sequencing
Study Abstract
  
SRA Study Id SRP183650
Study Title Oceanospirillales bacterium JGI 02_I10 Genome sequencing
Study Abstract
  
SRA Study Id SRP152658
Study Title Acidimicrobiales bacterium strain:JGI 02_L8 Genome sequencing
Study Abstract
  
SRA Study Id SRP152659
Study Title Acidimicrobiales bacterium strain:JGI 04_F11 Genome sequencing
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By Supratim Mukherjee on 2017-03-02
Last Modified By JGI automated process on 2019-06-18
PI Edward DeLong
Description The goal of this study is to perform a comprehensive open ocean community single cell genome and metagenome sequencing at the model open ocean time series study site - station ALOHA located 100km north of Oahu, the North Pacific Subtropical Gyre
Relevance Environmental
Study Information Link
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA No
Is HMP No
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Marine
Ecosystem Subtype Oceanic
Specific Ecosystem
STUDY COMPOSITION
Number of Biosamples 5
Number of Organisms 359
Number of Seq Projects 364
Number of Analysis Projects 364
Number of Related Studies 0

 

 

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