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Study

Study Name: Development of a pipeline for high-throughput recovery of near-complete and complete microbial genomes from complex metagenomic datasets

Projects

Biosamples

Organisms

Biosamples: 629 Seq. Projects: 847
STUDY INFORMATION
GOLD Study ID Gs0111384
Study Name Development of a pipeline for high-throughput recovery of near-complete and complete microbial genomes from complex metagenomic datasets
Other Names Development of a pipeline for high-throughput recovery of near-complete and complete microbial genomes from complex metagenomic datasets
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id SRP113392
Study Title Mariprofundus sp. JGI CrystG Aug08-3-L9 Genome sequencing
Study Abstract
  
SRA Study Id SRP113393
Study Title Mariprofundus sp. JGI CrystG Aug08-3-E6 Genome sequencing
Study Abstract
  
SRA Study Id SRP118168
Study Title Dehalococcoidia bacterium strain:JGI CrystG Apr3-4-M18 Genome sequencing
Study Abstract
  
SRA Study Id SRP113390
Study Title Gallionella sp. JGI CrystG Aug08-2-F14 Genome sequencing
Study Abstract
  
SRA Study Id SRP113391
Study Title Gallionella sp. JGI CrystG Aug08-3-I5 Genome sequencing
Study Abstract
  
SRA Study Id SRP113396
Study Title Mariprofundus sp. JGI CrystG Aug08-3-D6 Genome sequencing
Study Abstract
  
SRA Study Id SRP118165
Study Title Betaproteobacteria bacterium strain:JGI CrystG Apr3-1-J20 Genome sequencing
Study Abstract
  
SRA Study Id SRP113394
Study Title Mariprofundus sp. JGI CrystG Aug08-3-L18 Genome sequencing
Study Abstract
  
SRA Study Id SRP118166
Study Title Betaproteobacteria bacterium strain:JGI CrystG Apr3-1-K10 Genome sequencing
Study Abstract
  
SRA Study Id SRP113395
Study Title Mariprofundus sp. JGI CrystG Aug08-3-L12 Genome sequencing
Study Abstract
  
SRA Study Id SRP118161
Study Title unidentified bacterium strain:JGI CrystG Apr3-3-K16 Genome sequencing
Study Abstract
  
SRA Study Id SRP118160
Study Title unidentified bacterium strain:JGI CrystG Apr3-3-N20 Genome sequencing
Study Abstract
  
SRA Study Id SRP118163
Study Title unidentified bacterium strain:JGI CrystG Apr3-4-L15 Genome sequencing
Study Abstract
  
SRA Study Id SRP118162
Study Title unidentified bacterium strain:JGI CrystG Apr3-1-I21 Genome sequencing
Study Abstract
  
SRA Study Id SRP103587
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG15_big_fil_post_rev_8/21/14_0.20 metagenome
Study Abstract
  
SRA Study Id SRP124281
Study Title Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser CG22 metaT metatranscriptome
Study Abstract
  
SRA Study Id SRP135504
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-K13 Genome sequencing
Study Abstract
  
SRA Study Id SRP135503
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-3-B17 Genome sequencing
Study Abstract
  
SRA Study Id SRP124280
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG23_combo_of_CG06-09_8/20/14_all metagenome
Study Abstract
  
SRA Study Id SRP103583
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG08_land_8/20/14_0.20 metagenome
Study Abstract
  
SRA Study Id SRP135502
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-E7 Genome sequencing
Study Abstract
  
SRA Study Id SRP103584
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG07_land_8/20/14_0.80 metagenome
Study Abstract
  
SRA Study Id SRP135501
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-3-H9 Genome sequencing
Study Abstract
  
SRA Study Id SRP135509
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-3-G15 Genome sequencing
Study Abstract
  
SRA Study Id SRP135508
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-B12 Genome sequencing
Study Abstract
  
SRA Study Id SRP135506
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-3-N21 Genome sequencing
Study Abstract
  
SRA Study Id SRP135505
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-3-D12 Genome sequencing
Study Abstract
  
SRA Study Id SRP113381
Study Title Gallionella sp. JGI CrystG Aug02-3-D5 Genome sequencing
Study Abstract
  
SRA Study Id SRP118157
Study Title Bacteroidetes bacterium strain:JGI CrystG Apr3-3-J12 Genome sequencing
Study Abstract
  
SRA Study Id SRP113382
Study Title Gallionella sp. JGI CrystG Aug08-2-I22 Genome sequencing
Study Abstract
  
SRA Study Id SRP118159
Study Title unidentified bacterium strain:JGI CrystG Apr02-2-I4 Genome sequencing
Study Abstract
  
SRA Study Id SRP113385
Study Title Gallionella sp. JGI CrystG Aug08-2-J17 Genome sequencing
Study Abstract
  
SRA Study Id SRP113386
Study Title Gallionella sp. JGI CrystG Aug08-3-L10 Genome sequencing
Study Abstract
  
SRA Study Id SRP113383
Study Title Thiomicrospira sp. JGI CrystG Apr3-1-K11 Genome sequencing
Study Abstract
  
SRA Study Id SRP113384
Study Title Gallionella sp. JGI CrystG Aug08-2-K20 Genome sequencing
Study Abstract
  
SRA Study Id SRP118150
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-22 metagenome
Study Abstract
  
SRA Study Id SRP124279
Study Title Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser CG12 metaT metatranscriptome
Study Abstract
  
SRA Study Id SRP118151
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-24 metagenome
Study Abstract
  
SRA Study Id SRP135515
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-K10 Genome sequencing
Study Abstract
  
SRA Study Id SRP135511
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-I5 Genome sequencing
Study Abstract
  
SRA Study Id SRP135510
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-B9 Genome sequencing
Study Abstract
  
SRA Study Id SRP109696
Study Title Rhodoferax sp. JGI CrystG Apr3-1-K7 Genome sequencing
Study Abstract
  
SRA Study Id SRP113387
Study Title Gallionella sp. JGI CrystG Aug08-2-H13 Genome sequencing
Study Abstract
  
SRA Study Id SRP135518
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-3-D18 Genome sequencing
Study Abstract
  
SRA Study Id SRP135517
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-E19 Genome sequencing
Study Abstract
  
SRA Study Id SRP135516
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-D12 Genome sequencing
Study Abstract
  
SRA Study Id SRP114262
Study Title Thiomicrospira sp. JGI CrystG Aug3-1-E13 Genome sequencing
Study Abstract
  
SRA Study Id SRP114260
Study Title Mariprofundus sp. JGI CrystG Aug3-1-K12 Genome sequencing
Study Abstract
  
SRA Study Id SRP118186
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-01t metagenome
Study Abstract
  
SRA Study Id SRP114263
Study Title Mariprofundus sp. JGI CrystG Aug3-3-F16 Genome sequencing
Study Abstract
  
SRA Study Id SRP118188
Study Title unidentified bacterium strain:JGI CrystG Aug08-3-I16 Genome sequencing
Study Abstract
  
SRA Study Id SRP118183
Study Title unidentified bacterium strain:JGI CrystG Aug02-4-I16 Genome sequencing
Study Abstract
  
SRA Study Id SRP118185
Study Title Betaproteobacteria bacterium strain:JGI CrystG Aug02-3-K6 Genome sequencing
Study Abstract
  
SRA Study Id SRP118184
Study Title unidentified bacterium strain:JGI CrystG Apr3-4-K9 Genome sequencing
Study Abstract
  
SRA Study Id SRP118179
Study Title Coxiellaceae bacterium strain:JGI CrystG Apr3-4-N4 Genome sequencing
Study Abstract
  
SRA Study Id SRP118176
Study Title Flavobacteriaceae bacterium strain:JGI CrystG Apr3-1-N7 Genome sequencing
Study Abstract
  
SRA Study Id SRP118178
Study Title Armatimonadetes bacterium strain:JGI CrystG Apr3-1-J7 Genome sequencing
Study Abstract
  
SRA Study Id SRP118177
Study Title Euryarchaeota archaeon strain:JGI CrystG Apr3-4-C6 Genome sequencing
Study Abstract
  
SRA Study Id SRP118172
Study Title Dehalococcoidia bacterium strain:JGI CrystG Apr3-4-M19 Genome sequencing
Study Abstract
  
SRA Study Id SRP118171
Study Title Desulfococcus sp. JGI CrystG Apr3-3-J14 Genome sequencing
Study Abstract
  
SRA Study Id SRP118173
Study Title Elusimicrobia bacterium strain:JGI CrystG Apr3-2-I13 Genome sequencing
Study Abstract
  
SRA Study Id SRP118170
Study Title Elusimicrobia bacterium strain:JGI CrystG Apr3-4-M4 Genome sequencing
Study Abstract
  
SRA Study Id SRP114259
Study Title Rhodobacter sp. JGI CrystG Aug3-1-F17 Genome sequencing
Study Abstract
  
SRA Study Id SRP114257
Study Title Thiomicrospira sp. JGI CrystG Aug3-1-F18 Genome sequencing
Study Abstract
  
SRA Study Id SRP114256
Study Title Thiomicrospira sp. JGI CrystG Aug3-1-H5 Genome sequencing
Study Abstract
  
SRA Study Id SRP118125
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-10 metagenome
Study Abstract
  
SRA Study Id SRP118120
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-09 metagenome
Study Abstract
  
SRA Study Id SRP109767
Study Title Thiomicrospira sp. JGI CrystG Aug3-3-D13 Genome sequencing
Study Abstract
  
SRA Study Id SRP109761
Study Title Gallionella sp. JGI CrystG Aug3-3-I9 Genome sequencing
Study Abstract
  
SRA Study Id SRP109760
Study Title Gallionella sp. JGI CrystG Aug3-1-I19 Genome sequencing
Study Abstract
  
SRA Study Id SRP118129
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-12 metagenome
Study Abstract
  
SRA Study Id SRP118128
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-11 metagenome
Study Abstract
  
SRA Study Id SRP118114
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-04 metagenome
Study Abstract
  
SRA Study Id SRP118116
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-08 metagenome
Study Abstract
  
SRA Study Id SRP113462
Study Title Sulfurimonas sp. JGI CrystG Aug3-1-F10 Genome sequencing
Study Abstract
  
SRA Study Id SRP118110
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-02 metagenome
Study Abstract
  
SRA Study Id SRP113463
Study Title Gillisia sp. JGI CrystG Apr3-4-L8 Genome sequencing
Study Abstract
  
SRA Study Id SRP113460
Study Title Gallionella sp. JGI CrystG Aug3-1-F11 Genome sequencing
Study Abstract
  
SRA Study Id SRP118112
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-06 metagenome
Study Abstract
  
SRA Study Id SRP113461
Study Title Gallionella sp. JGI CrystG Aug3-3-I11 Genome sequencing
Study Abstract
  
SRA Study Id SRP123268
Study Title Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser CG13 metaT metatranscriptome
Study Abstract
  
SRA Study Id SRP109779
Study Title Thiomicrospira sp. JGI CrystG Aug3-3-E22 Genome sequencing
Study Abstract
  
SRA Study Id SRP123260
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG18_big_fil_WC_8/21/14_2.50 metagenome
Study Abstract
  
SRA Study Id SRP123261
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG22_combo_CG10-13_8/21/14_all metagenome
Study Abstract
  
SRA Study Id SRP109772
Study Title Mariprofundus sp. JGI CrystG Aug3-3-I13 Genome sequencing
Study Abstract
  
SRA Study Id SRP109771
Study Title Thiomicrospira sp. JGI CrystG Aug3-3-F18 Genome sequencing
Study Abstract
  
SRA Study Id SRP123264
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG19_WC_8/21/14_NA metagenome
Study Abstract
  
SRA Study Id SRP113466
Study Title Mariprofundus sp. JGI CrystG Aug08-3-F6 Genome sequencing
Study Abstract
  
SRA Study Id SRP109770
Study Title Mariprofundus sp. JGI CrystG Aug3-3-H8 Genome sequencing
Study Abstract
  
SRA Study Id SRP113467
Study Title Polaribacter sp. JGI CrystG Apr3-4-I5 Genome sequencing
Study Abstract
  
SRA Study Id SRP113465
Study Title Mariprofundus sp. JGI CrystG Aug08-2-G13 Genome sequencing
Study Abstract
  
SRA Study Id SRP118118
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-07 metagenome
Study Abstract
  
SRA Study Id SRP118117
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-05 metagenome
Study Abstract
  
SRA Study Id SRP118147
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-21 metagenome
Study Abstract
  
SRA Study Id SRP118146
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-25 metagenome
Study Abstract
  
SRA Study Id SRP118149
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-0102 metagenome
Study Abstract
  
SRA Study Id SRP118148
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-23 metagenome
Study Abstract
  
SRA Study Id SRP118145
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-20 metagenome
Study Abstract
  
SRA Study Id SRP118144
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-19 metagenome
Study Abstract
  
SRA Study Id SRP118140
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-18 metagenome
Study Abstract
  
SRA Study Id SRP128180
Study Title Ignavibacteriales bacterium strain:JGI CrystG Aug3-1-B21 Genome sequencing
Study Abstract
  
SRA Study Id SRP128182
Study Title Candidatus Gracilibacteria bacterium strain:JGI CrystG Apr3-3-C10 Genome sequencing
Study Abstract
  
SRA Study Id SRP128181
Study Title Candidatus Gracilibacteria bacterium strain:JGI CrystG Apr3-4-F17 Genome sequencing
Study Abstract
  
SRA Study Id SRP118135
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-16 metagenome
Study Abstract
  
SRA Study Id SRP118138
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-17 metagenome
Study Abstract
  
SRA Study Id SRP118131
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-14 metagenome
Study Abstract
  
SRA Study Id SRP118133
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-15 metagenome
Study Abstract
  
SRA Study Id SRP135496
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-3-E22 Genome sequencing
Study Abstract
  
SRA Study Id SRP135494
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-H10 Genome sequencing
Study Abstract
  
SRA Study Id SRP118130
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-13 metagenome
Study Abstract
  
SRA Study Id SRP135493
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-3-H15 Genome sequencing
Study Abstract
  
SRA Study Id SRP135492
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-J7 Genome sequencing
Study Abstract
  
SRA Study Id SRP128177
Study Title Desulfobulbaceae bacterium strain:JGI CrystG Aug08-2-N11 Genome sequencing
Study Abstract
  
SRA Study Id SRP152375
Study Title Spirochaetes bacterium strain:JGI CrystG Apr3-1-I5 Genome sequencing
Study Abstract
  
SRA Study Id SRP128178
Study Title Syntrophaceae bacterium strain:JGI CrystG Apr3-3-I16 Genome sequencing
Study Abstract
  
SRA Study Id SRP135497
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-3-E8 Genome sequencing
Study Abstract
  
SRA Study Id SRP118202
Study Title Deltaproteobacteria bacterium strain:JGI CrystG Aug3-1-D4 Genome sequencing
Study Abstract
  
SRA Study Id SRP118201
Study Title Flavobacteriaceae bacterium strain:JGI CrystG Aug08-2-K15 Genome sequencing
Study Abstract
  
SRA Study Id SRP118204
Study Title Legionellales bacterium strain:JGI CrystG Aug08-2-D11 Genome sequencing
Study Abstract
  
SRA Study Id SRP118203
Study Title Euryarchaeota archaeon strain:JGI CrystG Aug3-1-D16 Genome sequencing
Study Abstract
  
SRA Study Id SRP109729
Study Title Rhodoferax sp. JGI CrystG Aug08-2-M17 Genome sequencing
Study Abstract
  
SRA Study Id SRP109728
Study Title Gallionella sp. JGI CrystG Aug08-3-G21 Genome sequencing
Study Abstract
  
SRA Study Id SRP109727
Study Title Gallionella sp. JGI CrystG Aug08-3-N18 Genome sequencing
Study Abstract
  
SRA Study Id SRP109726
Study Title Gallionella sp. JGI CrystG Aug02-3-F19 Genome sequencing
Study Abstract
  
SRA Study Id SRP109725
Study Title Gallionella sp. JGI CrystG Aug02-3-E22 Genome sequencing
Study Abstract
  
SRA Study Id SRP109724
Study Title Gallionella sp. JGI CrystG Aug02-3-G14 Genome sequencing
Study Abstract
  
SRA Study Id SRP123239
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG01_land_8/20/14_3.00 metagenome
Study Abstract
  
SRA Study Id SRP109723
Study Title Gallionella sp. JGI CrystG Aug08-2-F8 Genome sequencing
Study Abstract
  
SRA Study Id SRP109722
Study Title Gallionella sp. JGI CrystG Aug02-3-K15 Genome sequencing
Study Abstract
  
SRA Study Id SRP118206
Study Title Gammaproteobacteria bacterium strain:JGI CrystG Aug08-2-E13 Genome sequencing
Study Abstract
  
SRA Study Id SRP118205
Study Title Legionellales bacterium strain:JGI CrystG Aug08-2-D14 Genome sequencing
Study Abstract
  
SRA Study Id SRP109739
Study Title Mariprofundus sp. JGI CrystG Aug08-2-K14 Genome sequencing
Study Abstract
  
SRA Study Id SRP109738
Study Title Thiomicrospira sp. JGI CrystG Aug08-2-H14 Genome sequencing
Study Abstract
  
SRA Study Id SRP109737
Study Title Turneriella sp. JGI CrystG Aug08-2-H17 Genome sequencing
Study Abstract
  
SRA Study Id SRP109736
Study Title Sulfurimonas sp. JGI CrystG Aug08-2-D21 Genome sequencing
Study Abstract
  
SRA Study Id SRP109735
Study Title Thiomicrospira sp. JGI CrystG Aug08-2-H11 Genome sequencing
Study Abstract
  
SRA Study Id SRP109734
Study Title Mariprofundus sp. JGI CrystG Aug08-2-E12 Genome sequencing
Study Abstract
  
SRA Study Id SRP183558
Study Title Parcubacteria group bacterium JGI CrystG Apr02-3-E6 Genome sequencing
Study Abstract
  
SRA Study Id SRP109733
Study Title Thiomicrospira sp. JGI CrystG Aug08-3-I20 Genome sequencing
Study Abstract
  
SRA Study Id SRP109732
Study Title Thiomicrospira sp. JGI CrystG Aug08-2-N9 Genome sequencing
Study Abstract
  
SRA Study Id SRP183559
Study Title Parcubacteria group bacterium JGI CrystG Apr02-2-I20 Genome sequencing
Study Abstract
  
SRA Study Id SRP183554
Study Title Parcubacteria group bacterium JGI CrystG Apr02-3-J13 Genome sequencing
Study Abstract
  
SRA Study Id SRP183553
Study Title Parcubacteria group bacterium JGI CrystG Apr02-3-D22 Genome sequencing
Study Abstract
  
SRA Study Id SRP183556
Study Title Parcubacteria group bacterium JGI CrystG Apr02-2-N10 Genome sequencing
Study Abstract
  
SRA Study Id SRP183555
Study Title Parcubacteria group bacterium JGI CrystG Apr02-2-L12 Genome sequencing
Study Abstract
  
SRA Study Id SRP183550
Study Title Parcubacteria group bacterium JGI CrystG Apr02-2-C5 Genome sequencing
Study Abstract
  
SRA Study Id SRP183552
Study Title Parcubacteria group bacterium JGI CrystG Apr02-2-D16 Genome sequencing
Study Abstract
  
SRA Study Id SRP183551
Study Title Parcubacteria group bacterium JGI CrystG Apr02-2-G4 Genome sequencing
Study Abstract
  
SRA Study Id SRP118223
Study Title Betaproteobacteria bacterium strain:JGI CrystG Aug3-3-B17 Genome sequencing
Study Abstract
  
SRA Study Id SRP118221
Study Title Rickettsiaceae bacterium strain:JGI CrystG Aug3-3-E10 Genome sequencing
Study Abstract
  
SRA Study Id SRP113450
Study Title Mariprofundus sp. JGI CrystG Aug3-1-E10 Genome sequencing
Study Abstract
  
SRA Study Id SRP123254
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG10_big_fil_rev_8/21/14_0.10 metagenome
Study Abstract
  
SRA Study Id SRP123255
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG12_big_fil_rev_8/21/14_0.65 metagenome
Study Abstract
  
SRA Study Id SRP123256
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG16_big_fil_post_rev_8/21/14_0.65 metagenome
Study Abstract
  
SRA Study Id SRP123259
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG17_big_fil_post_rev_8/21/14_2.50 metagenome
Study Abstract
  
SRA Study Id SRP109747
Study Title Mariprofundus sp. JGI CrystG Aug08-3-M14 Genome sequencing
Study Abstract
  
SRA Study Id SRP109746
Study Title Mariprofundus sp. JGI CrystG Aug08-3-F9 Genome sequencing
Study Abstract
  
SRA Study Id SRP183569
Study Title Thermotogae bacterium JGI CrystG Apr3-1-J9 Genome sequencing
Study Abstract
  
SRA Study Id SRP109745
Study Title Mariprofundus sp. JGI CrystG Aug08-2-G10 Genome sequencing
Study Abstract
  
SRA Study Id SRP109744
Study Title Mariprofundus sp. JGI CrystG Aug08-3-H8 Genome sequencing
Study Abstract
  
SRA Study Id SRP183568
Study Title Candidatus Parvarchaeota archaeon JGI CrystG Apr02-2-L16 Genome sequencing
Study Abstract
  
SRA Study Id SRP109743
Study Title Mariprofundus sp. JGI CrystG Aug08-3-J10 Genome sequencing
Study Abstract
  
SRA Study Id SRP183565
Study Title Candidatus Parvarchaeota archaeon JGI CrystG Apr02-2-J10 Genome sequencing
Study Abstract
  
SRA Study Id SRP183564
Study Title Candidatus Parvarchaeota archaeon JGI CrystG Apr02-2-N18 Genome sequencing
Study Abstract
  
SRA Study Id SRP123251
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG11_big_fil_rev_8/21/14_0.20 metagenome
Study Abstract
  
SRA Study Id SRP183567
Study Title Candidatus Saccharibacteria bacterium JGI CrystG Apr02-2-B14 Genome sequencing
Study Abstract
  
SRA Study Id SRP123252
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG14_big_fil_post_rev_8/21/14_0.10 metagenome
Study Abstract
  
SRA Study Id SRP183566
Study Title Parcubacteria group bacterium JGI CrystG Apr3-1-D11 Genome sequencing
Study Abstract
  
SRA Study Id SRP123253
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG13_big_fil_rev_8/21/14_2.50 metagenome
Study Abstract
  
SRA Study Id SRP183561
Study Title Parcubacteria group bacterium JGI CrystG Apr02-3-B18 Genome sequencing
Study Abstract
  
SRA Study Id SRP183560
Study Title Parcubacteria group bacterium JGI CrystG Apr02-3-L11 Genome sequencing
Study Abstract
  
SRA Study Id SRP183563
Study Title Candidatus Parvarchaeota archaeon JGI CrystG Apr02-2-H22 Genome sequencing
Study Abstract
  
SRA Study Id SRP183562
Study Title Parcubacteria group bacterium JGI CrystG Apr02-2-L22 Genome sequencing
Study Abstract
  
SRA Study Id SRP113459
Study Title Mariprofundus sp. JGI CrystG Aug08-3-J9 Genome sequencing
Study Abstract
  
SRA Study Id SRP118109
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-03 metagenome
Study Abstract
  
SRA Study Id SRP118108
Study Title Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-01 metagenome
Study Abstract
  
SRA Study Id SRP118213
Study Title Euryarchaeota archaeon strain:JGI CrystG Aug3-1-F4 Genome sequencing
Study Abstract
  
SRA Study Id SRP118212
Study Title Euryarchaeota archaeon strain:JGI CrystG Aug3-3-I21 Genome sequencing
Study Abstract
  
SRA Study Id SRP118215
Study Title Euryarchaeota archaeon strain:JGI CrystG Aug3-1-I17 Genome sequencing
Study Abstract
  
SRA Study Id SRP118214
Study Title Euryarchaeota archaeon strain:JGI CrystG Aug3-1-C22 Genome sequencing
Study Abstract
  
SRA Study Id SRP118211
Study Title Phyllobacteriaceae bacterium strain:JGI CrystG Aug3-3-C4 Genome sequencing
Study Abstract
  
SRA Study Id SRP123243
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG02_land_8/20/14_3.00 metagenome
Study Abstract
  
SRA Study Id SRP123244
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG05_land_8/20/14_0.10 metagenome
Study Abstract
  
SRA Study Id SRP123245
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG04_land_8/20/14_0.20 metagenome
Study Abstract
  
SRA Study Id SRP123246
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG06_land_8/20/14_3.00 metagenome
Study Abstract
  
SRA Study Id SRP109759
Study Title Gallionella sp. JGI CrystG Aug3-1-I7 Genome sequencing
Study Abstract
  
SRA Study Id SRP123249
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG09_land_8/20/14_0.10 metagenome
Study Abstract
  
SRA Study Id SRP109757
Study Title Gallionella sp. JGI CrystG Aug3-3-C6 Genome sequencing
Study Abstract
  
SRA Study Id SRP183579
Study Title Parcubacteria group bacterium JGI CrystG Apr3-1-E14 Genome sequencing
Study Abstract
  
SRA Study Id SRP109753
Study Title Gallionella sp. JGI CrystG Aug3-1-G11 Genome sequencing
Study Abstract
  
SRA Study Id SRP109752
Study Title Sulfurimonas sp. JGI CrystG Aug3-3-H11 Genome sequencing
Study Abstract
  
SRA Study Id SRP183576
Study Title Patescibacteria group bacterium JGI CrystG Apr3-4-M10 Genome sequencing
Study Abstract
  
SRA Study Id SRP183575
Study Title Parcubacteria group bacterium JGI CrystG Apr3-4-H15 Genome sequencing
Study Abstract
  
SRA Study Id SRP109751
Study Title Sulfurimonas sp. JGI CrystG Aug3-1-D14 Genome sequencing
Study Abstract
  
SRA Study Id SRP123240
Study Title Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/10/14 0.8 um filter metagenome
Study Abstract
  
SRA Study Id SRP183578
Study Title Patescibacteria group bacterium JGI CrystG Apr3-1-B19 Genome sequencing
Study Abstract
  
SRA Study Id SRP109750
Study Title Nitrospina sp. JGI CrystG Aug3-1-C8 Genome sequencing
Study Abstract
  
SRA Study Id SRP123241
Study Title Groundwater microbial communities from aquifer - Crystal Geyser CG03_land_8/20/14_0.80 metagenome
Study Abstract
  
SRA Study Id SRP183577
Study Title Parcubacteria group bacterium JGI CrystG Apr3-1-B4 Genome sequencing
Study Abstract
  
SRA Study Id SRP183572
Study Title Candidatus Dojkabacteria bacterium JGI CrystG Apr3-4-G16 Genome sequencing
Study Abstract
  
SRA Study Id SRP183571
Study Title Parcubacteria group bacterium JGI CrystG Apr3-4-D20 Genome sequencing
Study Abstract
  
SRA Study Id SRP183574
Study Title Parcubacteria group bacterium JGI CrystG Apr3-1-E17 Genome sequencing
Study Abstract
  
SRA Study Id SRP183573
Study Title Parcubacteria group bacterium JGI CrystG Apr3-4-H16 Genome sequencing
Study Abstract
  
SRA Study Id SRP118217
Study Title Euryarchaeota archaeon strain:JGI CrystG Aug3-3-F14 Genome sequencing
Study Abstract
  
SRA Study Id SRP118216
Study Title Euryarchaeota archaeon strain:JGI CrystG Aug3-3-C16 Genome sequencing
Study Abstract
  
SRA Study Id SRP183570
Study Title Parcubacteria group bacterium JGI CrystG Apr3-1-E7 Genome sequencing
Study Abstract
  
SRA Study Id SRP118218
Study Title Euryarchaeota archaeon strain:JGI CrystG Aug3-3-I7 Genome sequencing
Study Abstract
  
SRA Study Id SRP105567
Study Title Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/10/14 3 um filter metagenome
Study Abstract
  
SRA Study Id SRP105566
Study Title Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/9/14 0.2 um filter metagenome
Study Abstract
  
SRA Study Id SRP105568
Study Title Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/9/14 3 um filter metagenome
Study Abstract
  
SRA Study Id SRP109800
Study Title Mariprofundus sp. JGI CrystG Aug3-1-D5 Genome sequencing
Study Abstract
  
SRA Study Id SRP135548
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr3-3-E16 Genome sequencing
Study Abstract
  
SRA Study Id SRP105563
Study Title Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/8/14 3 um filter metagenome
Study Abstract
  
SRA Study Id SRP135547
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Aug08-2-L18 Genome sequencing
Study Abstract
  
SRA Study Id SRP135546
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr3-4-D4 Genome sequencing
Study Abstract
  
SRA Study Id SRP135545
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr3-3-D15 Genome sequencing
Study Abstract
  
SRA Study Id SRP183587
Study Title Parcubacteria group bacterium JGI CrystG Apr3-3-H20 Genome sequencing
Study Abstract
  
SRA Study Id SRP183586
Study Title Parcubacteria group bacterium JGI CrystG Apr3-3-H12 Genome sequencing
Study Abstract
  
SRA Study Id SRP183588
Study Title Parcubacteria group bacterium JGI CrystG Apr3-1-G16 Genome sequencing
Study Abstract
  
SRA Study Id SRP183583
Study Title Candidatus Dojkabacteria bacterium JGI CrystG Apr3-2-B17 Genome sequencing
Study Abstract
  
SRA Study Id SRP183582
Study Title Parcubacteria group bacterium JGI CrystG Apr3-2-C18 Genome sequencing
Study Abstract
  
SRA Study Id SRP183585
Study Title Parcubacteria group bacterium JGI CrystG Apr3-1-D14 Genome sequencing
Study Abstract
  
SRA Study Id SRP183584
Study Title Parcubacteria group bacterium JGI CrystG Apr3-4-D19 Genome sequencing
Study Abstract
  
SRA Study Id SRP183581
Study Title Parcubacteria group bacterium JGI CrystG Apr3-4-B8 Genome sequencing
Study Abstract
  
SRA Study Id SRP183580
Study Title Parcubacteria group bacterium JGI CrystG Apr3-2-C19 Genome sequencing
Study Abstract
  
SRA Study Id SRP135549
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Aug08-3-H12 Genome sequencing
Study Abstract
  
SRA Study Id SRP118198
Study Title Chloroflexi bacterium strain:JGI CrystG Aug08-3-K18 Genome sequencing
Study Abstract
  
SRA Study Id SRP118197
Study Title Betaproteobacteria bacterium strain:JGI CrystG Aug08-3-K8 Genome sequencing
Study Abstract
  
SRA Study Id SRP118199
Study Title Flavobacteriaceae bacterium strain:JGI CrystG Aug08-3-I19 Genome sequencing
Study Abstract
  
SRA Study Id SRP118194
Study Title Betaproteobacteria bacterium strain:JGI CrystG Aug08-2-I8 Genome sequencing
Study Abstract
  
SRA Study Id SRP135551
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr3-4-H18 Genome sequencing
Study Abstract
  
SRA Study Id SRP118193
Study Title Desulfococcus sp. JGI CrystG Aug08-2-N21 Genome sequencing
Study Abstract
  
SRA Study Id SRP135550
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr3-4-H4 Genome sequencing
Study Abstract
  
SRA Study Id SRP118196
Study Title Betaproteobacteria bacterium strain:JGI CrystG Aug08-2-C12 Genome sequencing
Study Abstract
  
SRA Study Id SRP118195
Study Title Rickettsiales bacterium strain:JGI CrystG Aug08-2-H10 Genome sequencing
Study Abstract
  
SRA Study Id SRP118192
Study Title Rickettsiaceae bacterium strain:JGI CrystG Aug08-3-H17 Genome sequencing
Study Abstract
  
SRA Study Id SRP118191
Study Title Kordiimonadales bacterium strain:JGI CrystG Aug08-3-G5 Genome sequencing
Study Abstract
  
SRA Study Id SRP183598
Study Title Candidatus Omnitrophica bacterium JGI CrystG Apr3-3-M10 Genome sequencing
Study Abstract
  
SRA Study Id SRP105570
Study Title Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/9/14 0.8 um filter metagenome
Study Abstract
  
SRA Study Id SRP183597
Study Title Candidatus Parvarchaeota archaeon JGI CrystG Apr3-1-B10 Genome sequencing
Study Abstract
  
SRA Study Id SRP183599
Study Title Parcubacteria group bacterium JGI CrystG Apr3-3-G16 Genome sequencing
Study Abstract
  
SRA Study Id SRP105571
Study Title Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/10/14 0.2 um filter metagenome
Study Abstract
  
SRA Study Id SRP183594
Study Title Patescibacteria group bacterium JGI CrystG Apr3-4-D15 Genome sequencing
Study Abstract
  
SRA Study Id SRP183593
Study Title Parcubacteria group bacterium JGI CrystG Apr3-4-F13 Genome sequencing
Study Abstract
  
SRA Study Id SRP183596
Study Title Parcubacteria group bacterium JGI CrystG Apr3-3-F16 Genome sequencing
Study Abstract
  
SRA Study Id SRP182144
Study Title Ignavibacteriaceae bacterium JGI CrystG Apr3-1-J4 Genome sequencing
Study Abstract
  
SRA Study Id SRP183595
Study Title Aquicella sp. JGI CrystG Aug08-2-J19 Genome sequencing
Study Abstract
  
SRA Study Id SRP183590
Study Title Parcubacteria group bacterium JGI CrystG Aug02-3-N7 Genome sequencing
Study Abstract
  
SRA Study Id SRP183592
Study Title Parcubacteria group bacterium JGI CrystG Aug02-3-N14 Genome sequencing
Study Abstract
  
SRA Study Id SRP183591
Study Title Parcubacteria group bacterium JGI CrystG Aug3-3-G8 Genome sequencing
Study Abstract
  
SRA Study Id SRP109704
Study Title Rhodoferax sp. JGI CrystG Apr3-1-L10 Genome sequencing
Study Abstract
  
SRA Study Id SRP109703
Study Title Ulignosibacterium sp. JGI CrystG Apr3-1-K12 Genome sequencing
Study Abstract
  
SRA Study Id SRP109702
Study Title Gallionella sp. JGI CrystG Apr3-1-L12 Genome sequencing
Study Abstract
  
SRA Study Id SRP135525
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr3-2-G12 Genome sequencing
Study Abstract
  
SRA Study Id SRP135522
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-3-J7 Genome sequencing
Study Abstract
  
SRA Study Id SRP135521
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-G10 Genome sequencing
Study Abstract
  
SRA Study Id SRP135520
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-3-G14 Genome sequencing
Study Abstract
  
SRA Study Id SRP135529
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr3-2-F10 Genome sequencing
Study Abstract
  
SRA Study Id SRP135528
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-3-B14 Genome sequencing
Study Abstract
  
SRA Study Id SRP135527
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-3-F11 Genome sequencing
Study Abstract
  
SRA Study Id SRP109717
Study Title Actinomyces sp. JGI CrystG Aug02-3-D10 Genome sequencing
Study Abstract
  
SRA Study Id SRP109716
Study Title Herbaspirillum sp. JGI CrystG Apr3-4-D8 Genome sequencing
Study Abstract
  
SRA Study Id SRP109715
Study Title Rhodoferax sp. JGI CrystG Apr3-4-L7 Genome sequencing
Study Abstract
  
SRA Study Id SRP109714
Study Title Rhodoferax sp. JGI CrystG Apr3-2-K10 Genome sequencing
Study Abstract
  
SRA Study Id SRP109713
Study Title Herbaspirillum sp. JGI CrystG Apr3-4-E4 Genome sequencing
Study Abstract
  
SRA Study Id SRP109712
Study Title Thiomicrospira sp. JGI CrystG Apr3-4-J10 Genome sequencing
Study Abstract
  
SRA Study Id SRP135536
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-F7 Genome sequencing
Study Abstract
  
SRA Study Id SRP109711
Study Title Gallionella sp. JGI CrystG Apr3-4-L18 Genome sequencing
Study Abstract
  
SRA Study Id SRP135535
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-K21 Genome sequencing
Study Abstract
  
SRA Study Id SRP109710
Study Title Gallionella sp. JGI CrystG Apr3-2-I8 Genome sequencing
Study Abstract
  
SRA Study Id SRP135534
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-E5 Genome sequencing
Study Abstract
  
SRA Study Id SRP135533
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-B6 Genome sequencing
Study Abstract
  
SRA Study Id SRP135532
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-2-N7 Genome sequencing
Study Abstract
  
SRA Study Id SRP135531
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr3-2-H21 Genome sequencing
Study Abstract
  
SRA Study Id SRP135530
Study Title Candidatus Microgenomates bacterium strain:JGI CrystG Apr02-3-N19 Genome sequencing
Study Abstract
  
Legacy ER Study ID 73988
Legacy GOLD ID
Added By Jyothi Mallajosyula on 2014-05-15
Last Modified By Tatiparthi Reddy on 2016-09-22
PI Jill Banfield
Description Development of a pipeline for high-throughput recovery of near-complete and complete microbial genomes from complex metagenomic datasets
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA No
Is HMP No
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type
Ecosystem Subtype
Specific Ecosystem
STUDY COMPOSITION
Number of Biosamples 629
Number of Organisms 218
Number of Seq Projects 847
Number of Analysis Projects 1996
Number of Related Studies 0

 

 

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