Studies
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52,460 |
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Biosamples
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170,231 |
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Sequencing Projects
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472,502 |
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Analysis Projects
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360,312 |
| Organisms | 460,377 |
| Biosamples: 0 Seq. Projects: 1 | |
| STUDY INFORMATION | |
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GOLD Study ID
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Gs0104599 |
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Study Name
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Candidatus Acidianus copahuensis ALE1 |
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Other Names
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NCBI Umbrella Bioproject Accession
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Legacy ER Study ID
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Legacy GOLD ID
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| Added By |
JGI automated process
on 2014-03-27 |
| Last Modified By | |
| PI | |
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Description
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Acidianus copahuensis ALE1, an archaea from the Crenarchaeota phylum, was isolated from hot springs in Copahue, and until now not reported anywhere else. A copahuensis is a facultative chemolithoautotrophic, thermoacidophilic organism (optimal growth temperature 75°C, pH 2.5). It is capable of autotrophic growth; aerobically using iron and different sulfur compounds as energy sources, and anaerobically using H2 and S as electron donors and Fe(III) or S as final electron acceptors. It can also grow heterotrophically using yeast extract or glucose. The genome sequence of A. copahuensis ALE1 strain was obtained using a whole-genome shotgun (WGS) strategy with a 454-FLX Titanium pyrosequencer at INDEAR, Argentina. Assembly was done using celera assembler version 7.0 with 52X genome coverage that generated a total of 68 contigs. The draft genome is 2,454,023 bases in length. The G+C content of the genomic DNA is 35.63 mol%. |
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Relevance
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Environmental |
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Study Information Visibility
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Public |
| Metagenomic Study |
No |
| Publication |
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| Is GEBA |
No |
| Is HMP |
No |
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ECOSYSTEM CLASSIFICATION
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| STUDY COMPOSITION | |
| Number of Biosamples | 0 |
| Number of Organisms |
1
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| Number of Seq Projects |
1
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| Number of Analysis Projects |
1
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Number of Related Studies
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0 |
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