PROJECT INFORMATION
GOLD Project ID
Gp0316527  
Project Name
Tritonibacter horizontis O3.65  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Tritonibacter horizontis O3.65 genome sequencing
NCBI BioProject ID 305382
NCBI BioProject Accession PRJNA305382
NCBI Locus Tag
TRIHO  
NCBI BioSample Accession SAMN04324894
PI
Added By JGI automated process on 2018-05-24
Last Modified By Hema Katta on 2019-01-04
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Goettingen Genomics Laboratory (Germany)
Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory
Collaborating Institute
  
Funding Agency
  
Project Description
The marine Alphaproteobacterium strain O3.65 was isolated from an enrichment culture of surface seawater contaminated with weathered oil (slicks) from the Deep Water Horizon (DWH) oil spill and belongs to the ubiquitous, diverse and ecological relevant Roseobacter clade within the Rhodobacteraceae. The strain is able to grow on several hydroxylated and substituted aromatic compounds. Strain O3.65 seems to be member of the microbial oil degradation network of the DWH oil spill and represents the new type species of a novel genus of the abundant Roseobacter group.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Standards in genomic sciences Draft genome sequence of the marine strain O3.65, cultivated from oil-polluted seawater of the Deepwater Horizon oil spill.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Tritonibacter horizontis O3.65 genome sequencing
Organism Tritonibacter horizontis O3.65
Analysis Projects Tritonibacter horizontis O3.65
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAIIx
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0452106
Organism Name
Tritonibacter horizontis O3.65  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Tritonibacter  
Genus Synonyms
  
Species
Tritonibacter horizontis  
Subspecies
  
Species Synonyms
  
Strain
O3.65  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
No  
Culture Type
  
Organism Type
Natural  
Uncultured Type
Population enrichment  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1768241
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Tritonibacter  
NCBI Species
Tritonibacter horizontis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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