PROJECT INFORMATION
GOLD Project ID
Gp0039044  
Project Name
Oesophagostomum dentatum  
Other Names
  
Legacy ER Project ID
44989  
Legacy GOLD ID
Gi0044989  
NCBI BioProject Name Oesophagostomum dentatum
NCBI BioProject ID 72579
NCBI BioProject Accession PRJNA72579
NCBI Locus Tag
  
NCBI BioSample Accession SAMN02866218
PI
Added By JGI automated process on 2013-04-02
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Agricultural
Sequencing Center The Genome Institute at Washington University (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX528547  (Link to NCBI )
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection unspecified
Library Name 2793600031
Library Layout SINGLE
Library Instrument 454 GS FLX Titanium
Spot Length 800
 
SRA Experiment Id SRX528548  (Link to NCBI )
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection unspecified
Library Name 2794810176
Library Layout PAIRED
Library Instrument 454 GS FLX Titanium
Spot Length 800
PROJECT COMPOSITION
Study Oesophagostomum dentatum Genome Sequencing
Organism Oesophagostomum dentatum
Analysis Projects Oesophagostomum dentatum
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0003110
Organism Name
Oesophagostomum dentatum  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
NEMATODES  
Genus
Oesophagostomum  
Genus Synonyms
  
Species
Oesophagostomum dentatum  
Subspecies
  
Species Synonyms
  
Strain
  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 61180
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Metazoa  
NCBI Phylum
Nematoda  
NCBI Class
Chromadorea  
NCBI Order
Strongylida  
NCBI Family
Chabertiidae  
NCBI Genus
Oesophagostomum  
NCBI Species
Oesophagostomum dentatum  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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