PROJECT INFORMATION
GOLD Project ID
Gp0007700  
Project Name
Francisella tularensis holarctica OSU18  
Other Names
  
Legacy ER Project ID
976  
Legacy GOLD ID
Gc01297  
NCBI BioProject Name Francisella tularensis subsp. holarctica OSU18
NCBI BioProject ID 32025
NCBI BioProject Accession PRJNA32025
NCBI Locus Tag
AYI  
NCBI BioSample Accession
PI
Added By Ionna Pagani on 2010-06-09
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biowarfare
Pathogen
Sequencing Center University of Maryland (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
TPA_reasm: Francisella tularensis subsp. holarctica OSU18, complete genome  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Resequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications PloS one 3(10):e3427 Re-assembly of the genome of Francisella tularensis subsp. holarctica OSU18.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Francisella tularensis holarctica OSU18
Organism Francisella tularensis holarctica OSU18
Analysis Projects Francisella tularensis holarctica OSU18
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
68462  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0000295
Organism Name
Francisella tularensis holarctica OSU18  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Francisella  
Genus Synonyms
  
Species
Francisella tularensis  
Subspecies
holarctica  
Species Synonyms
  
Strain
OSU18  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 393011
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Thiotrichales  
NCBI Family
Francisellaceae  
NCBI Genus
Francisella  
NCBI Species
Francisella tularensis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Tularemia
Known Habitats Host
Fresh water
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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