PROJECT INFORMATION | |
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GOLD Project ID
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Gp0006802
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Project Name
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Enterobacter cloacae cloacae ATCC 13047
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Other Names
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Legacy ER Project ID
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16536
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Legacy GOLD ID
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Gi06004, Gc01225
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NCBI BioProject Name | Enterobacter cloacae subsp. cloacae ATCC 13047 |
NCBI BioProject Accession
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PRJNA45793 |
NCBI Locus Tag
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ECL
|
NCBI BioSample Accession
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SAMN02603901 |
Source Sample ID
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|
PI | Lei Wang |
Added By | Nikos Kyrpides on 2010-02-05 |
Last Modified By | Supratim Mukherjee on 2018-11-28 |
Project Comments |
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Project Status
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Complete and Published
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Project Relevance
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Pest control Bioreactors Medical |
Sequencing Center
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Nankai University
(China)
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Collaborating Institute
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Funding Agency
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Project Description
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Enterobacter cloacae subsp. cloacae ATCC 13047 Genome sequencing
|
Is JGI Project |
No
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Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
|
EXTERNAL PROJECT LINKS | |
JGI Data Utilization Status
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JGI Award DOI
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Genome Publications
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Journal of bacteriology: 192(9):2463-4 Complete genome sequence of Enterobacter cloacae subsp. cloacae type strain ATCC 13047. PubMed: 20207761 DOI: 10.1128/JB.00067-10 |
Other Publications
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Ignored Publications
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Unassigned Publications
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SRA Experiment |
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PROJECT COMPOSITION | |
Study |
Enterobacter cloacae cloacae ATCC 13047 |
Organism |
Enterobacter cloacae cloacae ATCC 13047 |
Analysis Projects |
Enterobacter cloacae cloacae ATCC 13047 |
Number of Analysis Projects (AP) |
1 |
Number of Derived Analyis Projects (DAP) |
0
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SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
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Contamination Screening Input
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DNA Amplification Method
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Single Cell Lysis Protocol
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Single Cell Lysis Approach
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Sequencing Comments
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DNA Amplification Kit
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Sequencing Technology
(MIGS-29)
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454 GS FLX Sanger |
Library Method
(MIGS-28)
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5 Kb
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Library Layout
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Library Screening Method
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Number Of Reads
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10236 Sanger, 281462 single-end 454-FLX
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Read Size
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Vector
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GC Percent |
55
|
Chromosome Count |
1
|
Plasmid Count |
2
|
ORGANISM NAME | |
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GOLD Organism ID |
Go0006802 |
Organism Name |
Enterobacter cloacae cloacae ATCC 13047
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
BACTERIAL
|
Phylogeny |
PROTEOBACTERIA-GAMMA
|
Genus |
Enterobacter
|
Genus Synonyms |
|
Species |
Enterobacter cloacae
|
Subspecies |
cloacae
|
Species Synonyms |
|
Strain |
CDC 442-68
|
Strain Synonyms |
|
Serovar/Cultivar |
|
Culture Collection ID |
ATCC 13047
|
Type Strain |
Yes
|
Exemplar DOI |
10.1601/ex.3149
|
Exemplar Name |
Enterobacter cloacae cloacae
|
Taxon DOI |
10.1601/tx.10708
|
Biosafety Level |
1
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
|
ORGANISM TAXONOMY
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|
NCBI Taxonomy ID |
550 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Pseudomonadota
|
NCBI Class |
Gammaproteobacteria
|
NCBI Order |
Enterobacterales
|
NCBI Family |
Enterobacteriaceae
|
NCBI Genus |
Enterobacter
|
NCBI Species |
Enterobacter cloacae
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Host-associated
|
Ecosystem Category |
Mammals: Human
|
Ecosystem Type |
Nervous system
|
Ecosystem Subtype |
Subarachnoid space
|
Specific Ecosystem |
Cerebrospinal fluid
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
52251 |
Genbank 16S ID |
AJ251469 |
GENERAL PROPERTIES | |
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Oxygen Requirement |
Aerobe
|
Cell Shape |
Rod-shaped
|
Motility |
Motile
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Sporulation |
|
Temperature Range |
Mesophile
|
Salinity |
|
pH |
|
Cell Diameter |
|
Cell Length |
|
Color |
Grey
|
Gram Staining |
Gram-
|
Biotic Relationships | Free living |
Symbiotic Physical Interaction |
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Symbiotic Relationship |
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Symbiont Name |
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Symbiont Taxon ID |
|
Cell Arrangements |
|
Diseases |
Cholecystitis Urinary infection Meningitis Nosocomial infection Osteomyelitis |
Known Habitats |
Human intestinal microflora Host |
Metabolisms |
|
Phenotypes |
Opportunistic Pathogen |
Energy Sources |
Heterotroph |
CYANOBACTERIA METADATA | |
Filaments |
|
Filament Type |
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Differentiated Cells |
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Position Of Heterocysts |
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Cysts |
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Mode Of Reproduction |
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Trichome |
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Trichome Type |
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Carotenoids |
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Pigments |
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Phage Infectivity |
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Phage Type |
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Restriction Enzyme |
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Toxin Production |
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Toxin Type |
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Secondary Metabolites |
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Developmental Cycle |
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Branching |
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Gas Vesicles |
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Gas Vesicle Type |
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Diagnostic Inclusion Body Information |
|
Extracellular Structures |
|
Bloom Forming |
|
Pigment Type |
|
Complementary chromatic adaptation (CCA) |
|
Medium Types |
|
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