Studies
|
56,334 |
|
Biosamples
|
196,988 |
|
Sequencing Projects
|
525,360 |
|
Analysis Projects
|
384,991 |
| Organisms | 484,221 |
| PROJECT INFORMATION | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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GOLD Project ID
|
Gp0003829
|
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Project Name
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Bacillus mycoides DSM 2048
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Other Names
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Legacy ER Project ID
|
13707
|
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Legacy GOLD ID
|
Gi03191
|
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| NCBI BioProject Name | Bacillus mycoides DSM 2048 | ||||||||||||||||||
|
NCBI BioProject Accession
|
PRJNA29701 |
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|
NCBI Locus Tag
|
BMYCO0001
|
||||||||||||||||||
|
NCBI BioSample Accession
|
SAMN00727646 |
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Source Sample ID
|
|
||||||||||||||||||
| PI | Unknown | ||||||||||||||||||
| Added By | Nikos Kyrpides on 2008-06-05 | ||||||||||||||||||
| Last Modified By | JGI automated process on 2014-03-26 | ||||||||||||||||||
| Project Comments |
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Project Status
|
Permanent Draft
|
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Project Relevance
|
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Sequencing Center
|
Naval Medical Research Center
(USA)
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Collaborating Institute
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Funding Agency
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Project Description
|
Soil isolate
|
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| Is JGI Project |
No
|
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Project Information Visibility
|
Public | ||||||||||||||||||
| PROJECT TYPE | |||||||||||||||||||
|
Specimen
|
Organism |
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Nucleic Acid
|
DNA |
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Sequencing Strategy
|
Whole Genome Sequencing
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| EXTERNAL PROJECT LINKS | |||||||||||||||||||
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JGI Data Utilization Status
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JGI Award DOI
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Genome Publications
|
Genome research: 22(8):1512-24 Genomic characterization of the Bacillus cereus sensu lato species: backdrop to the evolution of Bacillus anthracis. PubMed: 22645259 DOI: 10.1101/gr.134437.111 |
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Other Publications
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Ignored Publications
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Unassigned Publications
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| SRA Experiment |
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| PROJECT COMPOSITION | |||||||||||||||||||
| Study |
Bacillus mycoides DSM 2048 |
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| Organism |
Bacillus mycoides DSM 2048 |
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| Analysis Projects |
Bacillus mycoides DSM 2048 |
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| Number of Analysis Projects (AP) |
1 |
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| Number of Derived Analyis Projects (DAP) |
0
|
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| SEQUENCING INFORMATION | |
|---|---|
|
Sequencing Status
|
Complete |
| Sequencing Quality (MIGS-31) |
Level 5: Non-contiguous Finished |
|
Finishing Goal
|
|
|
Contamination Screening Input
|
|
|
DNA Amplification Method
|
|
|
Single Cell Lysis Protocol
|
|
|
Single Cell Lysis Approach
|
|
|
Sequencing Comments
|
|
|
DNA Amplification Kit
|
|
|
Sequencing Technology
(MIGS-29)
|
|
|
Library Method
(MIGS-28)
|
|
|
Library Layout
|
|
|
Library Screening Method
|
|
|
Number Of Reads
|
|
|
Read Size
|
|
|
Vector
|
|
| GC Percent |
35
|
| Chromosome Count |
|
| Plasmid Count |
|
| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0003829 |
| Organism Name |
Bacillus mycoides DSM 2048
|
| Other names (alias, synonyms, short names, common names) |
|
| Organism Domain |
BACTERIAL
|
| Phylogeny |
BACILLOTA
|
| Genus |
Bacillus
|
| Genus Synonyms |
|
| Species |
Bacillus mycoides
|
| Subspecies |
|
| Species Synonyms |
|
| Strain |
DSM 2048
|
| Strain Synonyms |
|
| Serovar/Cultivar |
|
| Culture Collection ID |
DSM 2048
|
| Type Strain |
Yes
|
| Exemplar DOI |
10.1601/ex.4947
|
| Exemplar Name |
Bacillus mycoides
|
| Taxon DOI |
10.1601/tx.4947
|
| Biosafety Level |
1
|
| Organism Comments |
|
| Cultured |
Yes
|
| Culture Type |
Isolate
|
| Organism Type |
Natural
|
| Uncultured Type |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
|
ORGANISM TAXONOMY
|
|
| NCBI Taxonomy ID |
526997 |
| NCBI Superkingdom |
Bacteria
|
| NCBI Kingdom |
|
| NCBI Phylum |
Bacillota
|
| NCBI Class |
Bacilli
|
| NCBI Order |
Bacillales
|
| NCBI Family |
Bacillaceae
|
| NCBI Genus |
Bacillus
|
| NCBI Species |
Bacillus mycoides
|
| ISOLATION CLASSIFICATION | |
| Ecosystem |
Environmental
|
| Ecosystem Category |
Terrestrial
|
| Ecosystem Type |
Soil
|
| Ecosystem Subtype |
Unclassified
|
| Specific Ecosystem |
Unclassified
|
| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
|
| Genbank 16S ID |
AB021192 |
| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
Aerobe
|
| Cell Shape |
Rod-shaped
|
| Motility |
Nonmotile
|
| Sporulation |
Sporulating
|
| Temperature Range |
Mesophile
|
| Salinity |
|
| pH |
|
| Cell Diameter |
|
| Cell Length |
|
| Color |
|
| Gram Staining |
Gram+
|
| Biotic Relationships | Free living |
| Symbiotic Physical Interaction |
|
| Symbiotic Relationship |
|
| Symbiont Name |
|
| Symbiont Taxon ID |
|
| Cell Arrangements |
Chains |
| Diseases |
None |
| Known Habitats |
Soil |
| Metabolisms |
|
| Phenotypes |
|
| Energy Sources |
|
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