PROJECT INFORMATION
GOLD Project ID
Gp0003829  
Project Name
Bacillus mycoides DSM 2048  
Other Names
  
Legacy ER Project ID
13707  
Legacy GOLD ID
Gi03191  
NCBI BioProject Name Bacillus mycoides DSM 2048
NCBI BioProject Accession PRJNA29701
NCBI Locus Tag
BMYCO0001  
NCBI BioSample Accession SAMN00727646
Source Sample ID
PI Unknown
Added By Nikos Kyrpides on 2008-06-05
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Naval Medical Research Center (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Soil isolate  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications Genome research: 22(8):1512-24 Genomic characterization of the Bacillus cereus sensu lato species: backdrop to the evolution of Bacillus anthracis.
PubMed: 22645259 DOI: 10.1101/gr.134437.111
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX098596  (Link to NCBI )
Experiment Title 454 Sequencing of Bacillus mycoides Genomic Fragment Library
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name bmyco0001
Library Layout SINGLE
Library Instrument 454 GS FLX Titanium
PROJECT COMPOSITION
Study Bacillus mycoides DSM 2048
Organism Bacillus mycoides DSM 2048
Analysis Projects Bacillus mycoides DSM 2048
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 5: Non-contiguous Finished
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
35  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0003829
Organism Name
Bacillus mycoides DSM 2048  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACILLOTA  
Genus
Bacillus  
Genus Synonyms
  
Species
Bacillus mycoides  
Subspecies
  
Species Synonyms
  
Strain
DSM 2048  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 2048  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4947  
Exemplar Name
Bacillus mycoides  
Taxon DOI
10.1601/tx.4947  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 526997
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacillota  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Bacillaceae  
NCBI Genus
Bacillus  
NCBI Species
Bacillus mycoides  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AB021192
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Diseases None
Known Habitats Soil
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?