PROJECT INFORMATION
GOLD Project ID
Gp0000588  
Project Name
Methanococcus maripaludis S2  
Other Names
  
Legacy ER Project ID
10509  
Legacy GOLD ID
Gc00177  
NCBI BioProject Name Methanococcus maripaludis S2
NCBI BioProject Accession PRJNA10632
NCBI Locus Tag
MMP  
NCBI BioSample Accession SAMEA3138215
Source Sample ID
PI Unknown
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Alejandro Rodriguez Mojica on 2018-07-09
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biotechnological
Energy production
Sequencing Center University of Washington (USA)
Collaborating Institute
  
Funding Agency NIH (USA)
Project Description
Anaerobic methane-producing archeon  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications Journal of bacteriology: Complete genome sequence of the genetically tractable hydrogenotrophic methanogen Methanococcus maripaludis.
PubMed: 15466049
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Methanococcus maripaludis S2
Organism Methanococcus maripaludis S2
Analysis Projects Methanococcus maripaludis S2
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
small insert shotgun and fosmid libraries  
Library Layout
  
Library Screening Method
  
Number Of Reads
38601  
Read Size
  
Vector
  
GC Percent
33  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0015628
Organism Name
Methanococcus maripaludis S2  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA  
Genus
Methanococcus  
Genus Synonyms
  
Species
Methanococcus maripaludis  
Subspecies
  
Species Synonyms
  
Strain
S2  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 14266  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 267377
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Methanococci  
NCBI Order
Methanococcales  
NCBI Family
Methanococcaceae  
NCBI Genus
Methanococcus  
NCBI Species
Methanococcus maripaludis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 268749
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Obligate anaerobe  
Cell Shape
Coccus-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Salinity
  
pH
6.5  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Sediment
Hypersaline sediment
Aquatic
Salt marsh
Metabolisms Nitrogen fixation
Hydrogenotrophic
Methanogen
Phenotypes
  
Energy Sources Chemolithoautotroph
Lithotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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