PROJECT NAME
GOLD Project ID
Gp0000099  
Project Name
Phytophthora sojae P6497  
Other Names
  
Legacy ER Project ID
10078  
Legacy GOLD ID
Gc00607, Gi0010078  
NCBI BioProject Name Phytophthora sojae strain:P6497
NCBI BioProject ID 17989
NCBI BioProject Accession
PRJNA17989  
NCBI Locus Tag
PHYSO  
NCBI BioSample Accession
SAMN02953656  
PI Tyler B
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jyothi Mallajosyula on 2014-10-14
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Agricultural
Plant Pathogen
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Virginia Polytechnic Institute and State University (USA)
Funding Agency U.S. Department of Agriculture (France)
National Science Foundation (NSF) (USA)
U.S. Department of Energy (DOE) (USA)
Project Description
Phytophthora sojae Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications "Science (New York, N.Y.)" Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis.
Other Publications
  
PROJECT COMPOSITION
Studies Phytophthora sojae P6497
Analysis Projects Phytophthora sojae P6497
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
1029163  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0000099
Organism Name
Phytophthora sojae P6497  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
PROTISTS-STRAMENOPILES  
Genus
Phytophthora  
Genus Synonyms
  
Species
Phytophthora sojae  
Subspecies
  
Species Synonyms
  
Strain
P6497  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 67593
NCBI Kingdom
  
NCBI Phylum
  
NCBI Class
Oomycetes  
NCBI Order
Peronosporales  
NCBI Family
  
NCBI Genus
Phytophthora  
NCBI Species
Phytophthora sojae  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Root rot
Known Habitats
  
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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