PROJECT NAME
GOLD Project ID
Gp0000109  
Project Name
Drosophila pseudoobscura MV2-25  
Other Names
  
Legacy ER Project ID
10087  
Legacy GOLD ID
Gc00598, Gi0010087  
NCBI BioProject Name Drosophila pseudoobscura pseudoobscura
NCBI BioProject ID 10626
NCBI BioProject Accession
PRJNA10626  
NCBI Locus Tag
DPSE  
NCBI BioSample Accession
SAMN00779672  
PI Richards S
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jakob Jansson on 2010-08-04
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Baylor College of Medicine
Collaborating Institute
  
Funding Agency NIH (USA)
Project Description
Whole genome shotgun (WGS) project for Drosophila pseudoobscura strain MV2-25  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome research Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Drosophila pseudoobscura MV2-25
Analysis Projects Drosophila pseudoobscura MV2-25
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
3.0, 6.0, 40.0, 130.0 kb  
Number Of Reads
2600000  
Read Size
  
Vector
  
GC Percent
45  
Chromosome Count
4  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000109
Organism Name
Drosophila pseudoobscura MV2-25  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
ARTHROPODA  
Genus
Drosophila  
Genus Synonyms
  
Species
Drosophila pseudoobscura  
Subspecies
  
Species Synonyms
  
Strain
MV2-25  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 7237
NCBI Kingdom
Metazoa  
NCBI Phylum
Arthropoda  
NCBI Class
Insecta  
NCBI Order
Diptera  
NCBI Family
Drosophilidae  
NCBI Genus
Drosophila  
NCBI Species
Drosophila pseudoobscura  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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